RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 AUHQ13825 339 aaKnown RBP8.32□□□□□ -1.08
PRKDC-205ENST00000535375 BBS9Q3SYG4 887 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 UNC5AQ6ZN44 842 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 DAGLBQ8NCG7 672 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 FLAD1Q8NFF5 587 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 SYTL5Q8TDW5 730 aaPredicted RBP8.32□□□□□ -1.08
PRKDC-205ENST00000535375 KRTAP4-12Q9BQ66 201 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 PRDM14Q9GZV8 571 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 STRIP2Q9ULQ0 834 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 SLC12A7Q9Y666 1083 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 DNAJC25-GNG10A0A024R161 153 aa8.31□□□□□ -1.08
PRKDC-205ENST00000535375 RAC2P15153 192 aa8.31□□□□□ -1.08
PRKDC-205ENST00000535375 SNW1Q13573 536 aaKnown RBP8.31□□□□□ -1.08
PRKDC-205ENST00000535375 TMC3Q7Z5M5 1100 aa8.31□□□□□ -1.08
PRKDC-205ENST00000535375 ZNF655Q8N720 491 aaPredicted RBP8.31□□□□□ -1.08
PRKDC-205ENST00000535375 DHX38Q92620 1227 aaKnown RBP8.31□□□□□ -1.08
PRKDC-205ENST00000535375 TMEM59LQ9UK28 342 aa8.31□□□□□ -1.08
PRKDC-205ENST00000535375 SIGLEC6O43699 453 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 PAPLNO95428 1278 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 HK2P52789 917 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 PCBP3P57721 371 aaKnown RBP8.3□□□□□ -1.08
PRKDC-205ENST00000535375 PPP2R5EQ16537 467 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 RALGPS1Q5JS13 557 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 TDRD10Q5VZ19 366 aaKnown RBP8.3□□□□□ -1.08
PRKDC-205ENST00000535375 C7orf61Q8IZ16 206 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
PRKDC-205ENST00000535375 TCTN2Q96GX1 697 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 ADAMTS10Q9H324 1103 aa8.3□□□□□ -1.08
PRKDC-205ENST00000535375 PRAMEF1O95521 474 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 TP53P04637 393 aaPredicted RBP8.29□□□□□ -1.08
PRKDC-205ENST00000535375 ATF4P18848 351 aaPredicted RBP8.29□□□□□ -1.08
PRKDC-205ENST00000535375 ZYXQ15942 572 aaKnown RBP8.29□□□□□ -1.08
PRKDC-205ENST00000535375 RNF111Q6ZNA4 994 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 FAM168AQ92567 244 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 DSCC1Q9BVC3 393 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 HDAC8Q9BY41 377 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 CHST7Q9NS84 486 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 FAM86C1Q9NVL1 165 aa8.29□□□□□ -1.08
PRKDC-205ENST00000535375 C9IYK1 514 aa8.28□□□□□ -1.08
PRKDC-205ENST00000535375 MEIS1O00470 390 aa8.28□□□□□ -1.08
PRKDC-205ENST00000535375 KCNMB1Q16558 191 aa8.28□□□□□ -1.08
PRKDC-205ENST00000535375 NOL9Q5SY16 702 aaKnown RBP8.28□□□□□ -1.08
PRKDC-205ENST00000535375 C19orf47Q8N9M1 422 aaKnown RBP8.28□□□□□ -1.08
PRKDC-205ENST00000535375 SHDQ96IW2 340 aa8.28□□□□□ -1.08
PRKDC-205ENST00000535375 KIRREL1Q96J84 757 aa8.28□□□□□ -1.08
PRKDC-205ENST00000535375 GFOD1Q9NXC2 390 aa8.28□□□□□ -1.08
PRKDC-205ENST00000535375 ZNF214Q9UL59 606 aaPredicted RBP8.28□□□□□ -1.08
PRKDC-205ENST00000535375 SSBP05455 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
PRKDC-205ENST00000535375 SYPP08247 313 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 RPL10P27635 214 aaKnown RBP8.27□□□□□ -1.09
PRKDC-205ENST00000535375 DUSP4Q13115 394 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 GNPTABQ3T906 1256 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 ZSWIM9Q86XI8 627 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 OXR1Q8N573 874 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 USHBP1Q8N6Y0 703 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 FOXP3Q9BZS1 431 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 PHAXQ9H814 394 aaKnown RBP8.27□□□□□ -1.09
PRKDC-205ENST00000535375 TCFL5Q9UL49 500 aa8.27□□□□□ -1.09
PRKDC-205ENST00000535375 A0A1W2PQH9 124 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 TCEAL1Q15170 157 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 TMEM67Q5HYA8 995 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 C19orf73Q9NVV2 129 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 PRR13Q9NZ81 148 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
PRKDC-205ENST00000535375 SLC7A5Q01650 507 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 TEKQ02763 1124 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 ARID5AQ03989 594 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 AXDND1Q5T1B0 1012 aaPredicted RBP8.25□□□□□ -1.09
PRKDC-205ENST00000535375 DCAF15Q66K64 600 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 CWF19L1Q69YN2 538 aaKnown RBP8.25□□□□□ -1.09
PRKDC-205ENST00000535375 WAPLQ7Z5K2 1190 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 PPFIBP1Q86W92 1011 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 SPPL2CQ8IUH8 684 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 PDZD8Q8NEN9 1154 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 ABHD4Q8TB40 342 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 MYLIPQ8WY64 445 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.25□□□□□ -1.091e-8■□□□□ 8.1
PRKDC-205ENST00000535375 MINPP1Q9UNW1 487 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 LTBP3Q9NS15 1303 aa8.25□□□□□ -1.09
PRKDC-205ENST00000535375 FKTNO75072 461 aa8.24□□□□□ -1.09
PRKDC-205ENST00000535375 ZGLP1P0C6A0 271 aa8.24□□□□□ -1.09
PRKDC-205ENST00000535375 LCE3BQ5TA77 95 aa8.24□□□□□ -1.09
PRKDC-205ENST00000535375 FYB2Q5VWT5 728 aa8.24□□□□□ -1.09
PRKDC-205ENST00000535375 KRTAP1-3Q8IUG1 177 aa8.24□□□□□ -1.09
PRKDC-205ENST00000535375 CARMIL2Q6F5E8 1435 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 FITM1A5D6W6 292 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 GSNP06396 782 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 ITGA4P13612 1032 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 CD247P20963 164 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 ENDOUP21128 410 aaKnown RBP8.23□□□□□ -1.09
PRKDC-205ENST00000535375 CASP7P55210 303 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 ERVFC1P60507 584 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 CHRNEQ04844 493 aa8.23□□□□□ -1.09
PRKDC-205ENST00000535375 HEATR6Q6AI08 1181 aaKnown RBP8.23□□□□□ -1.09
PRKDC-205ENST00000535375 MPZL3Q6UWV2 235 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms