RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 NT5C3AQ9H0P0 336 aa19.18■□□□□ 0.66
PHRF1-206ENST00000534320 NEURL4Q96JN8 1562 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 RFX7Q2KHR2 1363 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 USP32Q8NFA0 1604 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 ARHGEF35A5YM69 484 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 OPA1O60313 960 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 MYCNP04198 464 aaPredicted RBP19.17■□□□□ 0.66
PHRF1-206ENST00000534320 OR52Z1P0C646 297 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 RHOXF2BP0C7M4 288 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 CCDC121Q6ZUS5 278 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 HOOK3Q86VS8 718 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 FMNL3Q8IVF7 1028 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 RHOXF2Q9BQY4 288 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 PSTPIP2Q9H939 334 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 ATP2C2O75185 946 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 TRIM37O94972 964 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 FOXO4P98177 505 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 SYMPKQ92797 1274 aaKnown RBP19.17■□□□□ 0.66
PHRF1-206ENST00000534320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.17■□□□□ 0.66
PHRF1-206ENST00000534320 TECP42680 631 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 EVCP57679 992 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 TMC4Q7Z404 712 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 TBC1D7Q9P0N9 293 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 CYP2E1P05181 493 aaPredicted RBP19.17■□□□□ 0.66
PHRF1-206ENST00000534320 PPP2R3AQ06190 1150 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 CERKLQ49MI3 558 aaPredicted RBP19.17■□□□□ 0.66
PHRF1-206ENST00000534320 VWA3BQ502W6 1294 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 CPXCR1Q8N123 301 aa19.17■□□□□ 0.66
PHRF1-206ENST00000534320 NAPGQ99747 312 aaPredicted RBP19.16■□□□□ 0.66
PHRF1-206ENST00000534320 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
PHRF1-206ENST00000534320 GPHNQ9NQX3 736 aaPredicted RBP19.16■□□□□ 0.66
PHRF1-206ENST00000534320 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.16■□□□□ 0.668e-6■■■□□ 18.5
PHRF1-206ENST00000534320 TMOD4Q9NZQ9 345 aa19.16■□□□□ 0.66
PHRF1-206ENST00000534320 MROH2AA6NES4 1674 aa19.16■□□□□ 0.66
PHRF1-206ENST00000534320 ATRIPQ8WXE1 791 aa19.16■□□□□ 0.66
PHRF1-206ENST00000534320 CNKSR1Q969H4 720 aa19.16■□□□□ 0.66
PHRF1-206ENST00000534320 TTC14Q96N46 770 aa19.16■□□□□ 0.66
PHRF1-206ENST00000534320 CLEC11AQ9Y240 323 aa19.16■□□□□ 0.66
PHRF1-206ENST00000534320 RPS6KA4O75676 772 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 MYRIPQ8NFW9 859 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 TDRD7Q8NHU6 1098 aaKnown RBP19.15■□□□□ 0.66
PHRF1-206ENST00000534320 CSRNP2Q9H175 543 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 SYNCQ9H7C4 482 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 FANCLQ9NW38 375 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 GTPBP6O43824 516 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-206ENST00000534320 MMP1P03956 469 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 TUBBP07437 444 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 MECOMQ03112 1051 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 RABL6Q3YEC7 729 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-206ENST00000534320 SOS2Q07890 1332 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-206ENST00000534320 LONP1P36776 959 aaKnown RBP19.15■□□□□ 0.66
PHRF1-206ENST00000534320 CHURC1Q8WUH1 139 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 PCDHA5Q9Y5H7 936 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 DEPDC5O75140 1603 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 ZNF500O60304 480 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-206ENST00000534320 TRAPPC10P48553 1259 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 NBPF11Q86T75 865 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 NELFCDQ8IXH7 590 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 ANKS4BQ8N8V4 417 aa19.15■□□□□ 0.66
PHRF1-206ENST00000534320 CYP2D7A0A087X1C5 515 aa19.14■□□□□ 0.66
PHRF1-206ENST00000534320 MYCLP12524 364 aaPredicted RBP19.14■□□□□ 0.66
PHRF1-206ENST00000534320 SMTNP53814 917 aa19.14■□□□□ 0.66
PHRF1-206ENST00000534320 KDM3AQ9Y4C1 1321 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 GRAPQ13588 217 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 GRAPLQ8TC17 118 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-206ENST00000534320 JAKMIP2Q96AA8 810 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 KIFC2Q96AC6 838 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 DDX39AO00148 427 aaKnown RBP19.14■□□□□ 0.65
PHRF1-206ENST00000534320 ADKP55263 362 aaKnown RBP19.14■□□□□ 0.65
PHRF1-206ENST00000534320 ICA1Q05084 483 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 LRMPQ12912 555 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.65
PHRF1-206ENST00000534320 PAXIP1Q6ZW49 1069 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-206ENST00000534320 TMEM87AQ8NBN3 555 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 KIF2CQ99661 725 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 TMEM110-MUSTN1A8MSY1 372 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 CCDC84Q86UT8 332 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-206ENST00000534320 RGS22Q8NE09 1264 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 RASAL2Q9UJF2 1139 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 RPAP1Q9BWH6 1393 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-206ENST00000534320 PXDNLA1KZ92 1463 aa19.14■□□□□ 0.65
PHRF1-206ENST00000534320 SNAP23O00161 211 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 ZBED4O75132 1171 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 NAA25Q14CX7 972 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 HOOK2Q96ED9 719 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 CCDC160A6NGH7 325 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 CCDC169A6NNP5 214 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 ERCC3P19447 782 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 TUBB2AQ13885 445 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 MORC3Q14149 939 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 MCTP2Q6DN12 878 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 TUBB2BQ9BVA1 445 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 PCDHA12Q9UN75 941 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 PPLO60437 1756 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 COL15A1P39059 1388 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 KCNJ18B7U540 433 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 NR5A1Q13285 461 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 KCNJ12Q14500 433 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 FAM212AQ96EL1 285 aa19.13■□□□□ 0.65
PHRF1-206ENST00000534320 PCDHA4Q9UN74 947 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms