RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 ARMT1Q9H993 441 aa18.06■□□□□ 0.48
CTSB-230ENST00000534149 XPNPEP3Q9NQH7 507 aa18.06■□□□□ 0.48
CTSB-230ENST00000534149 PHF24Q9UPV7 400 aa18.06■□□□□ 0.48
CTSB-230ENST00000534149 TMX2Q9Y320 296 aa18.06■□□□□ 0.48
CTSB-230ENST00000534149 SMIM22K7EJ46 135 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 WDR46O15213 610 aaKnown RBP18.05■□□□□ 0.48
CTSB-230ENST00000534149 PGK1P00558 417 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 PGK2P07205 417 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 RARBP10826 455 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 SLFNL1Q499Z3 407 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 MMP19Q99542 508 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 SH2D4AQ9H788 454 aa18.05■□□□□ 0.48
CTSB-230ENST00000534149 APBB1O00213 710 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 PRKAB2O43741 272 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 SLC25A27O95847 323 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 CLTBP09497 229 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 FOSL2P15408 326 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 TAL1P17542 331 aaPredicted RBP18.04■□□□□ 0.48
CTSB-230ENST00000534149 EPHB4P54760 987 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 LENG1Q96BZ8 264 aaPredicted RBP18.04■□□□□ 0.48
CTSB-230ENST00000534149 RNPC3Q96LT9 517 aaKnown RBP18.04■□□□□ 0.48
CTSB-230ENST00000534149 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 FBXO28Q9NVF7 368 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 TACC3Q9Y6A5 838 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 TTC28Q96AY4 2481 aa18.04■□□□□ 0.48
CTSB-230ENST00000534149 CYP2D7A0A087X1C5 515 aa18.03■□□□□ 0.48
CTSB-230ENST00000534149 PQBP1O60828 265 aaKnown RBP18.03■□□□□ 0.48
CTSB-230ENST00000534149 MBD4O95243 580 aa18.03■□□□□ 0.48
CTSB-230ENST00000534149 RNF180Q86T96 592 aa18.03■□□□□ 0.48
CTSB-230ENST00000534149 TINF2Q9BSI4 451 aa18.03■□□□□ 0.48
CTSB-230ENST00000534149 NRBP1Q9UHY1 535 aa18.03■□□□□ 0.48
CTSB-230ENST00000534149 A0A1W2PQ45 241 aaPredicted RBP18.02■□□□□ 0.48
CTSB-230ENST00000534149 A0A1W2PQY0 241 aa18.02■□□□□ 0.48
CTSB-230ENST00000534149 RAG1P15918 1043 aa18.02■□□□□ 0.48
CTSB-230ENST00000534149 CDK8P49336 464 aa18.02■□□□□ 0.48
CTSB-230ENST00000534149 ZNF792Q3KQV3 632 aa18.02■□□□□ 0.48
CTSB-230ENST00000534149 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
CTSB-230ENST00000534149 RIOX2Q8IUF8 465 aa18.02■□□□□ 0.48
CTSB-230ENST00000534149 CLASRPQ8N2M8 674 aaKnown RBP18.02■□□□□ 0.48
CTSB-230ENST00000534149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.02■□□□□ 0.48
CTSB-230ENST00000534149 ADAMTS5Q9UNA0 930 aa18.02■□□□□ 0.48
CTSB-230ENST00000534149 ROBO3Q96MS0 1386 aa18.02■□□□□ 0.47
CTSB-230ENST00000534149 KIAA0355O15063 1070 aa18.01■□□□□ 0.47
CTSB-230ENST00000534149 IFIT2P09913 472 aaKnown RBP18.01■□□□□ 0.47
CTSB-230ENST00000534149 ZNF865P0CJ78 1059 aaPredicted RBP18.01■□□□□ 0.47
CTSB-230ENST00000534149 EEF2P13639 858 aaKnown RBP18.01■□□□□ 0.47
CTSB-230ENST00000534149 KCTD2Q14681 263 aa18.01■□□□□ 0.47
CTSB-230ENST00000534149 CCDC17Q96LX7 622 aa18.01■□□□□ 0.47
CTSB-230ENST00000534149 ATP8A2Q9NTI2 1148 aa18.01■□□□□ 0.47
CTSB-230ENST00000534149 TMEM265A0A087WTH1 108 aa18■□□□□ 0.47
CTSB-230ENST00000534149 VWA5AO00534 786 aa18■□□□□ 0.47
CTSB-230ENST00000534149 RAD21O60216 631 aa18■□□□□ 0.47
CTSB-230ENST00000534149 AKR1A1P14550 325 aa18■□□□□ 0.47
CTSB-230ENST00000534149 ADD2P35612 726 aa18■□□□□ 0.47
CTSB-230ENST00000534149 STAT3P40763 770 aa18■□□□□ 0.47
CTSB-230ENST00000534149 FPGSQ05932 587 aa18■□□□□ 0.47
CTSB-230ENST00000534149 C12orf60Q5U649 245 aa18■□□□□ 0.47
CTSB-230ENST00000534149 C16orf86Q6ZW13 317 aa18■□□□□ 0.47
CTSB-230ENST00000534149 PANK1Q8TE04 598 aa18■□□□□ 0.47
CTSB-230ENST00000534149 TMEM39AQ9NV64 488 aa18■□□□□ 0.47
CTSB-230ENST00000534149 PAG1Q9NWQ8 432 aa18■□□□□ 0.47
CTSB-230ENST00000534149 PPP1R9AQ9ULJ8 1098 aa18■□□□□ 0.47
CTSB-230ENST00000534149 DIS3Q9Y2L1 958 aaKnown RBP18■□□□□ 0.47
CTSB-230ENST00000534149 MYH7P12883 1935 aa18■□□□□ 0.47
CTSB-230ENST00000534149 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 USP17L21D6R901 530 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 ADAMTS4O75173 837 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 CHGBP05060 677 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 FAM83BQ5T0W9 1011 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 REPS2Q8NFH8 660 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 KIF1BPQ96EK5 621 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 BOLA2Q9H3K6 86 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 GOPCQ9HD26 462 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 ZNF214Q9UL59 606 aaPredicted RBP17.99■□□□□ 0.47
CTSB-230ENST00000534149 CNPY2Q9Y2B0 182 aa17.99■□□□□ 0.47
CTSB-230ENST00000534149 FAAP100Q0VG06 881 aa17.98■□□□□ 0.47
CTSB-230ENST00000534149 GRIN2CQ14957 1233 aa17.98■□□□□ 0.47
CTSB-230ENST00000534149 AMOTL1Q8IY63 956 aa17.98■□□□□ 0.47
CTSB-230ENST00000534149 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
CTSB-230ENST00000534149 STARD7Q9NQZ5 370 aa17.98■□□□□ 0.47
CTSB-230ENST00000534149 SYNRGQ9UMZ2 1314 aa17.98■□□□□ 0.47
CTSB-230ENST00000534149 DNAJB2P25686 324 aa17.97■□□□□ 0.47
CTSB-230ENST00000534149 COPB2P35606 906 aa17.97■□□□□ 0.47
CTSB-230ENST00000534149 ACLYP53396 1101 aa17.97■□□□□ 0.47
CTSB-230ENST00000534149 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
CTSB-230ENST00000534149 USP38Q8NB14 1042 aa17.97■□□□□ 0.47
CTSB-230ENST00000534149 PRDM6Q9NQX0 595 aa17.97■□□□□ 0.47
CTSB-230ENST00000534149 GREB1LQ9C091 1923 aaPredicted RBP17.96■□□□□ 0.47
CTSB-230ENST00000534149 DCDC2CA8MYV0 355 aa17.96■□□□□ 0.47
CTSB-230ENST00000534149 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
CTSB-230ENST00000534149 TOX2Q96NM4 488 aa17.96■□□□□ 0.47
CTSB-230ENST00000534149 NUP88Q99567 741 aaPredicted RBP17.96■□□□□ 0.47
CTSB-230ENST00000534149 TSEN34Q9BSV6 310 aaKnown RBP17.96■□□□□ 0.47
CTSB-230ENST00000534149 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.475e-7■□□□□ 10.3
CTSB-230ENST00000534149 ZHX1Q9UKY1 873 aaPredicted RBP17.96■□□□□ 0.47
CTSB-230ENST00000534149 SLC4A4Q9Y6R1 1079 aa17.96■□□□□ 0.47
CTSB-230ENST00000534149 MUC3AQ02505 3323 aa17.96■□□□□ 0.47
CTSB-230ENST00000534149 MYO9BQ13459 2157 aa17.96■□□□□ 0.46
CTSB-230ENST00000534149 MCM3APO60318 1980 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms