RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ZNF394Q53GI3 561 aa6.47□□□□□ -1.37
ITGB1-219ENST00000534049 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
ITGB1-219ENST00000534049 FYB2Q5VWT5 728 aa6.47□□□□□ -1.37
ITGB1-219ENST00000534049 SMARCC1Q92922 1105 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-219ENST00000534049 HDAC8Q9BY41 377 aa6.47□□□□□ -1.37
ITGB1-219ENST00000534049 ADAMTS10Q9H324 1103 aa6.47□□□□□ -1.37
ITGB1-219ENST00000534049 SSU72P8A0A1W2PR75 194 aa6.46□□□□□ -1.38
ITGB1-219ENST00000534049 SIGLEC6O43699 453 aa6.46□□□□□ -1.38
ITGB1-219ENST00000534049 ZGLP1P0C6A0 271 aa6.46□□□□□ -1.38
ITGB1-219ENST00000534049 SNX17Q15036 470 aa6.46□□□□□ -1.38
ITGB1-219ENST00000534049 MLANAQ16655 118 aa6.46□□□□□ -1.38
ITGB1-219ENST00000534049 RBBP8NLQ8NC74 664 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-219ENST00000534049 MKRN2Q9H000 416 aaKnown RBP6.46□□□□□ -1.38
ITGB1-219ENST00000534049 PCDHB12Q9Y5F1 795 aa6.46□□□□□ -1.38
ITGB1-219ENST00000534049 SHISA3A0PJX4 238 aa6.45□□□□□ -1.38
ITGB1-219ENST00000534049 WASH4PA8MWX3 477 aa6.45□□□□□ -1.38
ITGB1-219ENST00000534049 POLR2BP30876 1174 aaKnown RBP6.45□□□□□ -1.38
ITGB1-219ENST00000534049 TEKQ02763 1124 aa6.45□□□□□ -1.38
ITGB1-219ENST00000534049 LINC00116Q8NCU8 138 aa6.45□□□□□ -1.38
ITGB1-219ENST00000534049 MRRFQ96E11 262 aaKnown RBP6.45□□□□□ -1.38
ITGB1-219ENST00000534049 LIN37Q96GY3 246 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-219ENST00000534049 SLC6A18Q96N87 628 aa6.45□□□□□ -1.38
ITGB1-219ENST00000534049 CWC22Q9HCG8 908 aaKnown RBP6.45□□□□□ -1.38
ITGB1-219ENST00000534049 SUCOQ9UBS9 1254 aaKnown RBP6.45□□□□□ -1.38
ITGB1-219ENST00000534049 PCDHGB7Q9Y5F8 929 aa6.45□□□□□ -1.38
ITGB1-219ENST00000534049 SCRIBQ14160 1630 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 BTBD11A6QL63 1104 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.44□□□□□ -1.38
ITGB1-219ENST00000534049 TRIM26Q12899 539 aaPredicted RBP6.44□□□□□ -1.38
ITGB1-219ENST00000534049 BBS9Q3SYG4 887 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 ZNF648Q5T619 568 aaPredicted RBP6.44□□□□□ -1.38
ITGB1-219ENST00000534049 FBXO15Q8NCQ5 510 aaPredicted RBP6.44□□□□□ -1.38
ITGB1-219ENST00000534049 TCTN2Q96GX1 697 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 SLC6A17Q9H1V8 727 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.44□□□□□ -1.381e-6■■□□□ 13.9
ITGB1-219ENST00000534049 ZNF281Q9Y2X9 895 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 SLC12A7Q9Y666 1083 aa6.44□□□□□ -1.38
ITGB1-219ENST00000534049 KIR2DL1P43626 348 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-219ENST00000534049 KIR2DL2P43627 348 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-219ENST00000534049 PMS1P54277 932 aaKnown RBP6.43□□□□□ -1.38
ITGB1-219ENST00000534049 RACK1P63244 317 aaKnown RBP6.43□□□□□ -1.38
ITGB1-219ENST00000534049 MESP2Q0VG99 397 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 IRF2BP1Q8IU81 584 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 KRTAP1-3Q8IUG1 177 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 OR6P1Q8NGX9 317 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 RASGRP4Q8TDF6 673 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 SLC9A7Q96T83 725 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 EPB41L4BQ9H329 900 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 CHST7Q9NS84 486 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 TCFL5Q9UL49 500 aa6.43□□□□□ -1.38
ITGB1-219ENST00000534049 PRAMEF1O95521 474 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 TSPAN15O95858 294 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 GUCY2CP25092 1073 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 PAK2Q13177 524 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 AUHQ13825 339 aaKnown RBP6.42□□□□□ -1.38
ITGB1-219ENST00000534049 FBXW10Q5XX13 1052 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 TMC3Q7Z5M5 1100 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 METTL16Q86W50 562 aaKnown RBP6.42□□□□□ -1.38
ITGB1-219ENST00000534049 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 LINC01599Q8WXQ3 324 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 GPRASP2Q96D09 838 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 PRDM14Q9GZV8 571 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 ANTXR1Q9H6X2 564 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 FBXL21Q9UKT6 434 aa6.42□□□□□ -1.38
ITGB1-219ENST00000534049 CCDC9Q9Y3X0 531 aaKnown RBP6.42□□□□□ -1.38
ITGB1-219ENST00000534049 DBX1A6NMT0 343 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 RPL10P27635 214 aaKnown RBP6.41□□□□□ -1.38
ITGB1-219ENST00000534049 BMP8BP34820 402 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 SOX9P48436 509 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 WAPLQ7Z5K2 1190 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 CCDC144CPQ8IYA2 1237 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 USHBP1Q8N6Y0 703 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 MAP6Q96JE9 813 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 SLC26A8Q96RN1 970 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 NSUN3Q9H649 340 aaKnown RBP6.41□□□□□ -1.38
ITGB1-219ENST00000534049 DCP1AQ9NPI6 582 aaPredicted RBP6.41□□□□□ -1.38
ITGB1-219ENST00000534049 ZMYM5Q9UJ78 669 aa6.41□□□□□ -1.38
ITGB1-219ENST00000534049 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
ITGB1-219ENST00000534049 GSNP06396 782 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 SYPP08247 313 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 ERVFC1P60507 584 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 RBM10P98175 930 aaKnown RBP6.4□□□□□ -1.38
ITGB1-219ENST00000534049 ANKRD39Q53RE8 183 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 NT5DC4Q86YG4 428 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 C7orf61Q8IZ16 206 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 C19orf47Q8N9M1 422 aaKnown RBP6.4□□□□□ -1.38
ITGB1-219ENST00000534049 ZNF512BQ96KM6 892 aaPredicted RBP6.4□□□□□ -1.38
ITGB1-219ENST00000534049 FCRL2Q96LA5 508 aaPredicted RBP6.4□□□□□ -1.38
ITGB1-219ENST00000534049 FOXP3Q9BZS1 431 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 RNF32Q9H0A6 362 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 SP110Q9HB58 689 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 TNFRSF10DQ9UBN6 386 aa6.4□□□□□ -1.38
ITGB1-219ENST00000534049 YBX2Q9Y2T7 364 aaKnown RBP6.4□□□□□ -1.38
ITGB1-219ENST00000534049 ACRP10323 421 aa6.39□□□□□ -1.39
ITGB1-219ENST00000534049 RAP1GAPP47736 663 aa6.39□□□□□ -1.39
ITGB1-219ENST00000534049 GJA8P48165 433 aa6.39□□□□□ -1.39
ITGB1-219ENST00000534049 EIF6P56537 245 aaKnown RBP6.39□□□□□ -1.39
ITGB1-219ENST00000534049 FZD5Q13467 585 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms