RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 ZNF532Q9HCE3 1301 aa17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 SLC25A27O95847 323 aa17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 C1orf53Q5VUE5 145 aa17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 CLASRPQ8N2M8 674 aaKnown RBP17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 RHPN1Q8TCX5 695 aa17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 LENG1Q96BZ8 264 aaPredicted RBP17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 RNPC3Q96LT9 517 aaKnown RBP17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 IL1RAPL2Q9NP60 686 aa17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 TACC3Q9Y6A5 838 aa17.27■□□□□ 0.36
SHARPIN-208ENST00000533948 ZNFX1Q9P2E3 1918 aaKnown RBP17.27■□□□□ 0.35
SHARPIN-208ENST00000533948 PARP14Q460N5 1801 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 HMMRO75330 724 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 PGK1P00558 417 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 TAL1P17542 331 aaPredicted RBP17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 DYNLL2Q96FJ2 89 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 CCDC17Q96LX7 622 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 DNAJC2Q99543 621 aaKnown RBP17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 NRBP1Q9UHY1 535 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 PHF24Q9UPV7 400 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 TMX2Q9Y320 296 aa17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 COL11A1P12107 1806 aaPredicted RBP17.26■□□□□ 0.35
SHARPIN-208ENST00000533948 SMIM22K7EJ46 135 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 APBB1O00213 710 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 GOLIM4O00461 696 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 PGK2P07205 417 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 CLTBP09497 229 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 IFIT2P09913 472 aaKnown RBP17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 RARBP10826 455 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 ICA1Q05084 483 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 RNF180Q86T96 592 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 XPNPEP3Q9NQH7 507 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 ATP8A2Q9NTI2 1148 aa17.25■□□□□ 0.35
SHARPIN-208ENST00000533948 WDR46O15213 610 aaKnown RBP17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 PQBP1O60828 265 aaKnown RBP17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 AKR1B1P15121 316 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 KCTD2Q14681 263 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 GRIN2CQ14957 1233 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 TMEM132BQ14DG7 1078 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 LCORLQ8N3X6 602 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 KIF1BPQ96EK5 621 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 MMP19Q99542 508 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 BCL11AQ9H165 835 aa17.24■□□□□ 0.35
SHARPIN-208ENST00000533948 A0A1W2PQ45 241 aaPredicted RBP17.23■□□□□ 0.35
SHARPIN-208ENST00000533948 A0A1W2PQY0 241 aa17.23■□□□□ 0.35
SHARPIN-208ENST00000533948 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
SHARPIN-208ENST00000533948 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
SHARPIN-208ENST00000533948 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
SHARPIN-208ENST00000533948 DIS3Q9Y2L1 958 aaKnown RBP17.23■□□□□ 0.35
SHARPIN-208ENST00000533948 MYH8P13535 1937 aa17.23■□□□□ 0.35
SHARPIN-208ENST00000533948 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 KIAA0355O15063 1070 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 RAG1P15918 1043 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 STAT3P40763 770 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 CDK8P49336 464 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 SLFNL1Q499Z3 407 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 TINF2Q9BSI4 451 aa17.22■□□□□ 0.35
SHARPIN-208ENST00000533948 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.22■□□□□ 0.355e-6■■■■■ 34.6
SHARPIN-208ENST00000533948 TMEM265A0A087WTH1 108 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 PRKAB2O43741 272 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 RAD21O60216 631 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 RAB11FIP3O75154 756 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 DNAJB2P25686 324 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 COPB2P35606 906 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 FPGSQ05932 587 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 RIOX2Q8IUF8 465 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 GOPCQ9HD26 462 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 TMEM39AQ9NV64 488 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 CNPY2Q9Y2B0 182 aa17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
SHARPIN-208ENST00000533948 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 USP17L12C9JPN9 530 aa17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 USP17L21D6R901 530 aa17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 ZNF865P0CJ78 1059 aaPredicted RBP17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 EEF2P13639 858 aaKnown RBP17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 ZNF792Q3KQV3 632 aa17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 PAG1Q9NWQ8 432 aa17.2■□□□□ 0.34
SHARPIN-208ENST00000533948 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 DCDC2CA8MYV0 355 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 VWA5AO00534 786 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 ADAMTS4O75173 837 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 MBD4O95243 580 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 AKR1A1P14550 325 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 ADD2P35612 726 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 IRX5P78411 483 aaPredicted RBP17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 SYMPKQ92797 1274 aaKnown RBP17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 TSEN34Q9BSV6 310 aaKnown RBP17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms