RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 SCG2P13521 617 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 KRT2P35908 639 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 FGD1P98174 961 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 ARL6IP4Q66PJ3 421 aaKnown RBP8.17□□□□□ -1.1
RNPC3-209ENST00000533834 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 PRR5LQ6MZQ0 368 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 FBXO38Q6PIJ6 1188 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 TMEM60Q9H2L4 133 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 CALM1P0DP23 149 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 CALM2P0DP24 149 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 CALM3P0DP25 149 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 GYS1P13807 737 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 TDO2P48775 406 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 GPSM2P81274 684 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 DDR1Q08345 913 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 TMC6Q7Z403 805 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 SYTL4Q96C24 671 aaPredicted RBP8.17□□□□□ -1.1
RNPC3-209ENST00000533834 GSDMAQ96QA5 445 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 PANX2Q96RD6 677 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 ZMYND12Q9H0C1 365 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 FAM13BQ9NYF5 915 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 hCG_1642624A0A1W2PR95 340 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 PRKAR2AP13861 404 aaKnown RBP8.17□□□□□ -1.1
RNPC3-209ENST00000533834 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 ISM2Q6H9L7 571 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 SYNE3Q6ZMZ3 975 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 MTMR9Q96QG7 549 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 WDR24Q96S15 920 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 NACAP1Q9BZK3 213 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
RNPC3-209ENST00000533834 ARID2Q68CP9 1835 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 PPP1R11O60927 126 aaPredicted RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 HIBADHP31937 336 aaKnown RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 ERVK-24P63145 666 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 AMPD2Q01433 879 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 MTF1Q14872 753 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 ZNF662Q6ZS27 426 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 DUSP9Q99956 384 aaKnown RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 NYXQ9GZU5 481 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 ANKRD2Q9GZV1 360 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 BARHL2Q9NY43 387 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 TFCP2L1Q9NZI6 479 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 MRFAP1Q9Y605 127 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 SPATA31A6Q5VVP1 1343 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 CCDC196A0A1B0GTZ2 297 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 STX10O60499 249 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 PRPHP41219 470 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 PTGDRQ13258 359 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 FAM47AQ5JRC9 791 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 SPATA1Q5VX52 437 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 JMYQ8N9B5 988 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 SDF4Q9BRK5 362 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 SPZ1Q9BXG8 430 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 RIOX1Q9H6W3 641 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 LRP2BPQ9P2M1 347 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 A0A0G2JMZ2 1700 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 LRRC37A2A6NM11 1700 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 POLRMTO00411 1230 aaKnown RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 APPP05067 770 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 ETF1P62495 437 aaKnown RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 DMTNQ08495 405 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 WDR59Q6PJI9 974 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 TRMT44Q8IYL2 757 aaKnown RBP8.16□□□□□ -1.1
RNPC3-209ENST00000533834 IGSF22Q8N9C0 903 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 ERO1AQ96HE7 468 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 POLLQ9UGP5 575 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 LEMD3Q9Y2U8 911 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 NFE2L3Q9Y4A8 694 aa8.16□□□□□ -1.1
RNPC3-209ENST00000533834 GOLGA6L19H0YKK7 550 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 FXR1P51114 621 aaKnown RBP eCLIP8.15□□□□□ -1.1
RNPC3-209ENST00000533834 MIIPQ5JXC2 388 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 IFIT1BQ5T764 474 aaKnown RBP8.15□□□□□ -1.1
RNPC3-209ENST00000533834 ZSCAN29Q8IWY8 852 aaPredicted RBP8.15□□□□□ -1.1
RNPC3-209ENST00000533834 ZC3H3Q8IXZ2 948 aaKnown RBP8.15□□□□□ -1.1
RNPC3-209ENST00000533834 ADSSL1Q8N142 457 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 CNNM3Q8NE01 707 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 OLIG1Q8TAK6 271 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 DYNLL2Q96FJ2 89 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 PURBQ96QR8 312 aaKnown RBP8.15□□□□□ -1.1
RNPC3-209ENST00000533834 PCDHA4Q9UN74 947 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 TUBB4AP04350 444 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 UBASH3AP57075 661 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 SEMA3FQ13275 785 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 KCNB1Q14721 858 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 TTC38Q5R3I4 469 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 SPECC1LQ69YQ0 1117 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 TTI2Q6NXR4 508 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 CERS5Q8N5B7 392 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 CCSER1Q9C0I3 900 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 PPP2R2CQ9Y2T4 447 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 WDR90Q96KV7 1748 aa8.15□□□□□ -1.1
RNPC3-209ENST00000533834 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
RNPC3-209ENST00000533834 POTEIP0CG38 1075 aa8.15□□□□□ -1.11
RNPC3-209ENST00000533834 ECM1Q16610 540 aa8.15□□□□□ -1.11
RNPC3-209ENST00000533834 MEA1Q16626 185 aa8.15□□□□□ -1.11
RNPC3-209ENST00000533834 FILIP1Q7Z7B0 1213 aa8.15□□□□□ -1.11
RNPC3-209ENST00000533834 RWDD2AQ9UIY3 292 aa8.15□□□□□ -1.11
RNPC3-209ENST00000533834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms