RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 SYNRGQ9UMZ2 1314 aa13.58□□□□□ -0.24
ATM-222ENST00000533733 C10orf71Q711Q0 1435 aa13.58□□□□□ -0.24
ATM-222ENST00000533733 GPR75-ASB3A0A0A6YYF3 556 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 VWA3AA6NCI4 1184 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
ATM-222ENST00000533733 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 HOXA7P31268 230 aaPredicted RBP13.57□□□□□ -0.24
ATM-222ENST00000533733 PRPHP41219 470 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 ETF1P62495 437 aaKnown RBP13.57□□□□□ -0.24
ATM-222ENST00000533733 NCBP1Q09161 790 aaKnown RBP13.57□□□□□ -0.24
ATM-222ENST00000533733 CUL4BQ13620 913 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 LTBP1Q14766 1721 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 ZNF174Q15697 407 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 E2F4Q16254 413 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 EARS2Q5JPH6 523 aaKnown RBP13.57□□□□□ -0.24
ATM-222ENST00000533733 PIK3AP1Q6ZUJ8 805 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 TXNRD3Q86VQ6 643 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 DPF2Q92785 391 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 EPSTI1Q96J88 318 aa13.57□□□□□ -0.24
ATM-222ENST00000533733 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
ATM-222ENST00000533733 ITIH6Q6UXX5 1313 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
ATM-222ENST00000533733 UBAP1LF5GYI3 381 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 SMIM22K7EJ46 135 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 CYP2D6P10635 497 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 KCNQ4P56696 695 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 FMR1Q06787 632 aaKnown RBP eCLIP13.56□□□□□ -0.24
ATM-222ENST00000533733 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 CDKAL1Q5VV42 579 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 SH3RF3Q8TEJ3 882 aaPredicted RBP13.56□□□□□ -0.24
ATM-222ENST00000533733 AK8Q96MA6 479 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 PANX2Q96RD6 677 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 BAG1Q99933 345 aaPredicted RBP13.56□□□□□ -0.24
ATM-222ENST00000533733 RTFDC1Q9BY42 306 aaPredicted RBP13.56□□□□□ -0.24
ATM-222ENST00000533733 IL17RBQ9NRM6 502 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 MAD2L2Q9UI95 211 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 GGA1Q9UJY5 639 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 BAZ2BQ9UIF8 2168 aaKnown RBP13.56□□□□□ -0.24
ATM-222ENST00000533733 FAM205CA6NFA0 338 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 M0R2N6 131 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 NMT2O60551 498 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 TPM1P09493 284 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 HOXA10P31260 410 aaPredicted RBP13.56□□□□□ -0.24
ATM-222ENST00000533733 PPP1R2P41236 205 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 TRIM14Q14142 442 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 FAM196AQ6ZSG2 479 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 C16orf86Q6ZW13 317 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 USP49Q70CQ1 688 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 NEDD1Q8NHV4 660 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 GJD4Q96KN9 370 aaPredicted RBP13.56□□□□□ -0.24
ATM-222ENST00000533733 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 CD209Q9NNX6 404 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 BARHL2Q9NY43 387 aa13.56□□□□□ -0.24
ATM-222ENST00000533733 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 GAKO14976 1311 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 GNA11P29992 359 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 ZNF658Q5TYW1 1059 aaPredicted RBP13.55□□□□□ -0.24
ATM-222ENST00000533733 PDXDC2PQ6P474 469 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 KRT25Q7Z3Z0 450 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 INTS13Q9NVM9 706 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 RWDD2AQ9UIY3 292 aa13.55□□□□□ -0.24
ATM-222ENST00000533733 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 A0A087X0B3 334 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 RASA1P20936 1047 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 AFMP43652 599 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 NOVP48745 357 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 KCNB1Q14721 858 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 CNGA4Q8IV77 575 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 C4orf32Q8N8J7 132 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 TGFBRAP1Q8WUH2 860 aa13.54□□□□□ -0.24
ATM-222ENST00000533733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.54□□□□□ -0.24
ATM-222ENST00000533733 ESYT2A0FGR8 921 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 TMEM232C9JQI7 657 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 AKR1B15C9JRZ8 316 aaPredicted RBP13.53□□□□□ -0.24
ATM-222ENST00000533733 UFL1O94874 794 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 MCM7P33993 719 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 BTDP43251 543 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 STIM1Q13586 685 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 PTF1AQ7RTS3 328 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 PPFIBP1Q86W92 1011 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 TC2NQ8N9U0 490 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 ZNF397Q8NF99 534 aaPredicted RBP13.53□□□□□ -0.24
ATM-222ENST00000533733 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
ATM-222ENST00000533733 CCDC47Q96A33 483 aaKnown RBP13.53□□□□□ -0.24
ATM-222ENST00000533733 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms