RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 IQCB1Q15051 598 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 CTR9Q6PD62 1173 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 OLFM4Q6UX06 510 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 NOSTRINQ8IVI9 506 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 CKAP2LQ8IYA6 745 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 GUCD1Q96NT3 240 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 DCP1AQ9NPI6 582 aaPredicted RBP11.12□□□□□ -0.63
CHKA-207ENST00000533728 HPSEQ9Y251 543 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 MINDY4BA8MYZ0 360 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 MYO1BO43795 1136 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 BMP15O95972 392 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 POLR3DP05423 398 aaPredicted RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 CEBPZQ03701 1054 aaKnown RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 PDE4BQ07343 736 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 GNL2Q13823 731 aaKnown RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 LRIT3Q3SXY7 679 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 RRP12Q5JTH9 1297 aaKnown RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 PLA2G4DQ86XP0 818 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 CEP57L1Q8IYX8 460 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 ENAHQ8N8S7 591 aaPredicted RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 SDR42E1Q8WUS8 393 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 PHKBQ93100 1093 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 CFHR5Q9BXR6 569 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 FTOQ9C0B1 505 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHKA-207ENST00000533728 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 TOMM22Q9NS69 142 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 PODXL2Q9NZ53 605 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 CEP131Q9UPN4 1083 aa11.11□□□□□ -0.63
CHKA-207ENST00000533728 IQSEC3Q9UPP2 1182 aaPredicted RBP11.11□□□□□ -0.63
CHKA-207ENST00000533728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHKA-207ENST00000533728 GOLGA6L19H0YKK7 550 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 ZNF202O95125 648 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 BAG3O95817 575 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
CHKA-207ENST00000533728 IL1R1P14778 569 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 PLCG2P16885 1265 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 HIRAP54198 1017 aaPredicted RBP11.1□□□□□ -0.63
CHKA-207ENST00000533728 DYNLL1P63167 89 aaKnown RBP11.1□□□□□ -0.63
CHKA-207ENST00000533728 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
CHKA-207ENST00000533728 FUT2Q10981 343 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
CHKA-207ENST00000533728 RESP18Q5W5W9 173 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 DZIP1Q86YF9 867 aaKnown RBP11.1□□□□□ -0.63
CHKA-207ENST00000533728 SLF2Q8IX21 1173 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 PIBF1Q8WXW3 757 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 PSMD1Q99460 953 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 SDF4Q9BRK5 362 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 TCP11L1Q9NUJ3 509 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 ATP6V0A2Q9Y487 856 aa11.1□□□□□ -0.63
CHKA-207ENST00000533728 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 USP17L21D6R901 530 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 NEMFO60524 1076 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 TPM2P07951 284 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 RXRAP19793 462 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 KLRK1P26718 216 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 ZNF75DP51815 510 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 NDUFA8P51970 172 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 NLRP12P59046 1061 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 TROAPQ12815 778 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 LUZP1Q86V48 1076 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 RAB11FIP4Q86YS3 637 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 MAFAQ8NHW3 353 aaPredicted RBP11.09□□□□□ -0.63
CHKA-207ENST00000533728 TBC1D22AQ8WUA7 517 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
CHKA-207ENST00000533728 AIFM3Q96NN9 605 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 RTFDC1Q9BY42 306 aaPredicted RBP11.09□□□□□ -0.63
CHKA-207ENST00000533728 DNAJC25Q9H1X3 360 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 VPS33BQ9H267 617 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 HOOK1Q9UJC3 728 aaKnown RBP11.09□□□□□ -0.63
CHKA-207ENST00000533728 TUBE1Q9UJT0 475 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 SUGT1Q9Y2Z0 365 aa11.09□□□□□ -0.63
CHKA-207ENST00000533728 SCN9AQ15858 1988 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 A0A1B0GVL5 298 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 AP5Z1O43299 807 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 MYCP01106 439 aaPredicted RBP11.08□□□□□ -0.64
CHKA-207ENST00000533728 PFKFB1P16118 471 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 PTPREP23469 700 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 KIF5BP33176 963 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 SYKP43405 635 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 TM4SF4P48230 202 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 GNAQP50148 359 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 ZRSR1Q15695 479 aaKnown RBP11.08□□□□□ -0.64
CHKA-207ENST00000533728 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
CHKA-207ENST00000533728 C12orf60Q5U649 245 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms