RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 FCER1AP12319 257 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 USP5P45974 858 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 TNNI3KQ59H18 835 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 KIAA1755Q5JYT7 1200 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 MFSD5Q6N075 450 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 NCAPG2Q86XI2 1143 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 TRMT2AQ8IZ69 625 aaKnown RBP9.52□□□□□ -0.89
NXF1-215ENST00000533440 MIGA1Q8NAN2 632 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 TINF2Q9BSI4 451 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 DIS3Q9Y2L1 958 aaKnown RBP9.52□□□□□ -0.89
NXF1-215ENST00000533440 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
NXF1-215ENST00000533440 FPGT-TNNI3KV9GXZ4 949 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 REV3LO60673 3130 aa9.52□□□□□ -0.89
NXF1-215ENST00000533440 ZNFX1Q9P2E3 1918 aaKnown RBP9.52□□□□□ -0.89
NXF1-215ENST00000533440 PLXNA1Q9UIW2 1896 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 MOXD2PA6NHM9 499 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 SLC25A27O95847 323 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 AKR1A1P14550 325 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 TAL1P17542 331 aaPredicted RBP9.51□□□□□ -0.89
NXF1-215ENST00000533440 ACLYP53396 1101 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 PPIGQ13427 754 aaKnown RBP eCLIP9.51□□□□□ -0.891e-7■■□□□ 13.1
NXF1-215ENST00000533440 ZNF792Q3KQV3 632 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 CCSAPQ6IQ19 270 aaPredicted RBP9.51□□□□□ -0.89
NXF1-215ENST00000533440 CCDC174Q6PII3 467 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 KLHDC9Q8NEP7 349 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 NUP133Q8WUM0 1156 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 ARHGAP45Q92619 1136 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 ATG4CQ96DT6 458 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 C1QTNF1Q9BXJ1 281 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 TANGO6Q9C0B7 1094 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 STARD7Q9NQZ5 370 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 SYNGAP1Q96PV0 1343 aa9.51□□□□□ -0.89
NXF1-215ENST00000533440 FLOT1O75955 427 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 GNAI2P04899 355 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 BMP1P13497 986 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 CDK7P50613 346 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 PLS1Q14651 629 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 TMEM132BQ14DG7 1078 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 CCDC85BQ15834 202 aaPredicted RBP9.5□□□□□ -0.89
NXF1-215ENST00000533440 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
NXF1-215ENST00000533440 CCDC129Q6ZRS4 1044 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
NXF1-215ENST00000533440 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
NXF1-215ENST00000533440 ADAMTS5Q9UNA0 930 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 ELP1O95163 1332 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 MROH7Q68CQ1 1323 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 SYNRGQ9UMZ2 1314 aa9.5□□□□□ -0.89
NXF1-215ENST00000533440 PARP14Q460N5 1801 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 IDH1O75874 414 aaKnown RBP9.49□□□□□ -0.89
NXF1-215ENST00000533440 PGK2P07205 417 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 CSF2RAP15509 400 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 IGFBP4P22692 258 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 CST5P28325 142 aaPredicted RBP9.49□□□□□ -0.89
NXF1-215ENST00000533440 RAB30Q15771 203 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 KCNA10Q16322 511 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 PSRC1Q6PGN9 363 aaPredicted RBP9.49□□□□□ -0.89
NXF1-215ENST00000533440 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 RIOX2Q8IUF8 465 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 SIAH1Q8IUQ4 282 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 MAGEB6Q8N7X4 407 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 LENG1Q96BZ8 264 aaPredicted RBP9.49□□□□□ -0.89
NXF1-215ENST00000533440 MMP19Q99542 508 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 DBNLQ9UJU6 430 aaKnown RBP9.49□□□□□ -0.89
NXF1-215ENST00000533440 TMX2Q9Y320 296 aa9.49□□□□□ -0.89
NXF1-215ENST00000533440 MPHOSPH10O00566 681 aaKnown RBP9.48□□□□□ -0.89
NXF1-215ENST00000533440 WDR46O15213 610 aaKnown RBP9.48□□□□□ -0.89
NXF1-215ENST00000533440 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
NXF1-215ENST00000533440 ACRP10323 421 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 RARSP54136 660 aaKnown RBP9.48□□□□□ -0.89
NXF1-215ENST00000533440 EVX2Q03828 476 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 KCTD2Q14681 263 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 TMEM179Q6ZVK1 233 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 TMEM199Q8N511 208 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 MSL3Q8N5Y2 521 aaKnown RBP9.48□□□□□ -0.89
NXF1-215ENST00000533440 SSH3Q8TE77 659 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 HERVK_113Q902F9 699 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 GLT1D1Q96MS3 346 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
NXF1-215ENST00000533440 NKX2-4Q9H2Z4 354 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 VCPKMTQ9H867 229 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 MSRAQ9UJ68 235 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 FAM184BQ9ULE4 1060 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 CNPY2Q9Y2B0 182 aa9.48□□□□□ -0.89
NXF1-215ENST00000533440 COL11A1P12107 1806 aaPredicted RBP9.47□□□□□ -0.89
NXF1-215ENST00000533440 TCF20Q9UGU0 1960 aaKnown RBP9.47□□□□□ -0.89
NXF1-215ENST00000533440 MYADML2A6NDP7 307 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 ARVCFO00192 962 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 DUSP11O75319 330 aaKnown RBP9.47□□□□□ -0.89
NXF1-215ENST00000533440 SNAI1O95863 264 aaPredicted RBP9.47□□□□□ -0.89
NXF1-215ENST00000533440 COPB2P35606 906 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 STAT3P40763 770 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 MAMDC4Q6UXC1 1216 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 FAM126BQ8IXS8 530 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 SPICE1Q8N0Z3 855 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 REPS2Q8NFH8 660 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms