RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 PNMA3Q9UL41 463 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 LIMCH1Q9UPQ0 1083 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 AGTPBP1Q9UPW5 1226 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 WDR33Q9C0J8 1336 aaKnown RBP24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 DHX16O60231 1041 aaKnown RBP24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 OSBPP22059 807 aa24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 AK2P54819 239 aa24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 TROAPQ12815 778 aa24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 TOB2Q14106 344 aaPredicted RBP24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 ANKRD23Q86SG2 305 aa24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 NUP133Q8WUM0 1156 aa24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 ISY1Q9ULR0 285 aaKnown RBP24.63■■□□□ 1.53
PTP4A2-215ENST00000533408 PLA2G6O60733 806 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 ALDH1A1P00352 501 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 SNHG28P0DPA3 235 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 PDHBP11177 359 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 VCAM1P19320 739 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 HOXA7P31268 230 aaPredicted RBP24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 APOBRQ0VD83 1088 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 CCDC96Q2M329 555 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 FAM160B2Q86V87 743 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 SPICE1Q8N0Z3 855 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 FANCBQ8NB91 859 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 GPHNQ9NQX3 736 aaPredicted RBP24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 HOXC10Q9NYD6 342 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 FEM1BQ9UK73 627 aa24.62■■□□□ 1.53
PTP4A2-215ENST00000533408 FDX1P10109 184 aa24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 TM4SF4P48230 202 aa24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 ZNF543Q08ER8 600 aa24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 CPLX2Q6PUV4 134 aaKnown RBP24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 TANGO6Q9C0B7 1094 aa24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 RPAP3Q9H6T3 665 aaPredicted RBP24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 SH2B1Q9NRF2 756 aaPredicted RBP24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 MTMR7Q9Y216 660 aa24.61■■□□□ 1.53
PTP4A2-215ENST00000533408 GOLGA8BA8MQT2 603 aa24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 SMARCA1P28370 1054 aa24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 METAP2P50579 478 aaKnown RBP eCLIP24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 IRX3P78415 501 aaPredicted RBP24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 KIF23Q02241 960 aaPredicted RBP24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 COL9A3Q14050 684 aaPredicted RBP24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 GRM4Q14833 912 aa24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 GTF3C2Q8WUA4 911 aaPredicted RBP24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 SLKQ9H2G2 1235 aaPredicted RBP24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 BRPF3Q9ULD4 1205 aa24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 MYPNQ86TC9 1320 aa24.6■■□□□ 1.53
PTP4A2-215ENST00000533408 GOLGA8AA7E2F4 631 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 PDIA3P30101 505 aaKnown RBP24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 VEGFBP49765 207 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 STAT2P52630 851 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 IKQ13123 557 aaPredicted RBP24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 COG2Q14746 738 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 RTN1Q16799 776 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 FAM83BQ5T0W9 1011 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 CATSPERGQ6ZRH7 1159 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 MICU3Q86XE3 530 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 BRI3BPQ8WY22 251 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 SENP2Q9HC62 589 aa24.59■■□□□ 1.53
PTP4A2-215ENST00000533408 PRPF38AQ8NAV1 312 aaKnown RBP24.58■■□□□ 1.53
PTP4A2-215ENST00000533408 PNMA2Q9UL42 364 aa24.58■■□□□ 1.53
PTP4A2-215ENST00000533408 PHIPQ8WWQ0 1821 aa24.58■■□□□ 1.53
PTP4A2-215ENST00000533408 PALM3A6NDB9 673 aaPredicted RBP24.57■■□□□ 1.52
PTP4A2-215ENST00000533408 TMEM232C9JQI7 657 aa24.57■■□□□ 1.52
PTP4A2-215ENST00000533408 PDHXO00330 501 aa24.57■■□□□ 1.52
PTP4A2-215ENST00000533408 FLOT1O75955 427 aa24.57■■□□□ 1.52
PTP4A2-215ENST00000533408 IFNL1Q8IU54 200 aa24.57■■□□□ 1.52
PTP4A2-215ENST00000533408 PARK7Q99497 189 aaKnown RBP24.57■■□□□ 1.52
PTP4A2-215ENST00000533408 CTDP1Q9Y5B0 961 aaPredicted RBP24.57■■□□□ 1.52
PTP4A2-215ENST00000533408 BTBD19C9JJ37 291 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 KLRF2D3W0D1 207 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 CPLX1O14810 134 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 CDKL5O76039 1030 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 TRAF1Q13077 416 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 MOGSQ13724 837 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 GPAT2Q6NUI2 795 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 BTNL9Q6UXG8 535 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 SNX21Q969T3 373 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 SLF1Q9BQI6 1058 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 GPCPD1Q9NPB8 672 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 TPCN1Q9ULQ1 816 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 MYH4Q9Y623 1939 aa24.56■■□□□ 1.52
PTP4A2-215ENST00000533408 PFKFB2O60825 505 aa24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 KIAA1755Q5JYT7 1200 aa24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 TREML2Q5T2D2 321 aa24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 KCTD1Q719H9 257 aa24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 MB21D1Q8N884 522 aa24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 MYL10Q9BUA6 226 aa24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 RBM27Q9P2N5 1060 aaKnown RBP24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 MAD2L2Q9UI95 211 aa24.55■■□□□ 1.52
PTP4A2-215ENST00000533408 NID2Q14112 1375 aa24.54■■□□□ 1.52
PTP4A2-215ENST00000533408 ZBED4O75132 1171 aa24.54■■□□□ 1.52
PTP4A2-215ENST00000533408 GCLCP48506 637 aaPredicted RBP24.54■■□□□ 1.52
PTP4A2-215ENST00000533408 SMCR8Q8TEV9 937 aaPredicted RBP24.54■■□□□ 1.52
PTP4A2-215ENST00000533408 NUP88Q99567 741 aaPredicted RBP24.54■■□□□ 1.52
PTP4A2-215ENST00000533408 AOC2O75106 756 aa24.53■■□□□ 1.52
PTP4A2-215ENST00000533408 HTRA3P83110 453 aa24.53■■□□□ 1.52
PTP4A2-215ENST00000533408 MAP2K1Q02750 393 aaPredicted RBP24.53■■□□□ 1.52
PTP4A2-215ENST00000533408 NOL8Q76FK4 1167 aaKnown RBP24.53■■□□□ 1.52
PTP4A2-215ENST00000533408 HSCBQ8IWL3 235 aa24.53■■□□□ 1.52
PTP4A2-215ENST00000533408 ASCC2Q9H1I8 757 aaPredicted RBP24.53■■□□□ 1.52
PTP4A2-215ENST00000533408 ZFYVE28Q9HCC9 887 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms