RNA–Protein interactions for RNA: ENST00000533259.1

PDE4DIP-231, Transcript of phosphodiesterase 4D interacting protein, human

TSL 4

Gene PDE4DIP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-231	ENST00000533259	CUL9	Q8IWT3	2517 aa		12.81	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	MYH8	P13535	1937 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	USP17L12	C9JPN9	530 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	USP17L21	D6R901	530 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	CNGA1	P29973	690 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	TTC22	Q5TAA0	569 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	OLFML2B	Q68BL8	750 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259		Q7L0L9	218 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	DPP9	Q86TI2	863 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	VCPKMT	Q9H867	229 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	MYH7	P12883	1935 aa		12.8	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	PARP14	Q460N5	1801 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	MSC	O60682	206 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	MDM2	Q00987	491 aa	Predicted RBP	12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	UBE3C	Q15386	1083 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	PRAMEF19	Q5SWL8	479 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	CTR9	Q6PD62	1173 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	C16orf86	Q6ZW13	317 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	SPICE1	Q8N0Z3	855 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	DEFB123	Q8N688	67 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	MB21D1	Q8N884	522 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	SLC17A8	Q8NDX2	589 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	ATG4C	Q96DT6	458 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	CCDC17	Q96LX7	622 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	PUS7L	Q9H0K6	701 aa	Known RBP	12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	UNC80	Q8N2C7	3258 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259		A0A0G2JMZ2	1700 aa		12.79	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	ZNF236	Q9UL36	1845 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	DNM1L	O00429	736 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	FLOT1	O75955	427 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	EEF2	P13639	858 aa	Known RBP	12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	ATN1	P54259	1190 aa	Predicted RBP	12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	ICA1	Q05084	483 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	TMEM132B	Q14DG7	1078 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	GJC2	Q5T442	439 aa	Predicted RBP	12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	ABRA	Q8N0Z2	381 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	EVI5L	Q96CN4	794 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	FSD1	Q9BTV5	496 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	MROH8	Q9H579	483 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	ARHGEF10L	Q9HCE6	1279 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	MTMR10	Q9NXD2	777 aa		12.78	□□□□□ -0.36
PDE4DIP-231	ENST00000533259	COL11A1	P12107	1806 aa	Predicted RBP	12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	WDR46	O15213	610 aa	Known RBP	12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SEPT4	O43236	478 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	PLS1	Q14651	629 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	ANO1	Q5XXA6	986 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SLC39A5	Q6ZMH5	540 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	NCAPG2	Q86XI2	1143 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	MAML3	Q96JK9	1138 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.77	□□□□□ -0.37	1e-6	■■□□□ 11.9
PDE4DIP-231	ENST00000533259	FBXO28	Q9NVF7	368 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SLC4A4	Q9Y6R1	1079 aa		12.77	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	POTEB2	H3BUK9	544 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	GSPT1	P15170	499 aa	Known RBP	12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SDS	P20132	328 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	RTP1	P59025	263 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	KBTBD3	Q8NAB2	608 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	ARRDC4	Q8NCT1	418 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	REPS2	Q8NFH8	660 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	STRBP	Q96SI9	672 aa	Known RBP	12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	KANSL2	Q9H9L4	492 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	PRUNE2	Q8WUY3	3088 aa		12.76	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	GSG1L2	A8MUP6	293 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	VWA5A	O00534	786 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SLC25A27	O95847	323 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	FCER1A	P12319	257 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SNX17	Q15036	470 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	LRRC41	Q15345	812 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	EYS	Q5T1H1	3165 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	ZSCAN25	Q6NSZ9	544 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	RIOX2	Q8IUF8	465 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SH2D4A	Q9H788	454 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SLC5A4	Q9NY91	659 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	STXBP5L	Q9Y2K9	1186 aa		12.75	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	DLL1	O00548	723 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	RNF113A	O15541	343 aa	Known RBP	12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	PGK2	P07205	417 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	TAL1	P17542	331 aa	Predicted RBP	12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	STAT3	P40763	770 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	ZNF792	Q3KQV3	632 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	SBK1	Q52WX2	424 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	BMP2KL	Q5H9B9	411 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	OSBP2	Q969R2	916 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	ZNF214	Q9UL59	606 aa	Predicted RBP	12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	PPP1R9A	Q9ULJ8	1098 aa		12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	GREB1L	Q9C091	1923 aa	Predicted RBP	12.74	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	RASA1	P20936	1047 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	ADCYAP1R1	P41586	468 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	FAM47A	Q5JRC9	791 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	FAM83B	Q5T0W9	1011 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	C1orf53	Q5VUE5	145 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	AMOTL1	Q8IY63	956 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	MMP19	Q99542	508 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	TINF2	Q9BSI4	451 aa		12.73	□□□□□ -0.37
PDE4DIP-231	ENST00000533259	NRBP1	Q9UHY1	535 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms