RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 NBPF11Q86T75 865 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 CCDC84Q86UT8 332 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-215ENST00000533145 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 LPAR1Q92633 364 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 C12orf42Q96LP6 360 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 ZNF408Q9H9D4 720 aa16.4■□□□□ 0.22
HIF3A-215ENST00000533145 CXCL11O14625 94 aa16.39■□□□□ 0.21
HIF3A-215ENST00000533145 PLA2G6O60733 806 aa16.39■□□□□ 0.21
HIF3A-215ENST00000533145 SPP2Q13103 211 aa16.39■□□□□ 0.21
HIF3A-215ENST00000533145 KIAA1755Q5JYT7 1200 aa16.39■□□□□ 0.21
HIF3A-215ENST00000533145 SRBD1Q8N5C6 995 aaKnown RBP16.39■□□□□ 0.21
HIF3A-215ENST00000533145 CLMNQ96JQ2 1002 aa16.39■□□□□ 0.21
HIF3A-215ENST00000533145 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
HIF3A-215ENST00000533145 STK36Q9NRP7 1315 aa16.39■□□□□ 0.21
HIF3A-215ENST00000533145 KLRF2D3W0D1 207 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
HIF3A-215ENST00000533145 BMP3P12645 472 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 DDIT3P35638 169 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 SLC1A4P43007 532 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 FSTL1Q12841 308 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 PPIL2Q13356 520 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 BTNL9Q6UXG8 535 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 RGS22Q8NE09 1264 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 SLC10A4Q96EP9 437 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 RNF26Q9BY78 433 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-215ENST00000533145 RIOX1Q9H6W3 641 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 KCNH4Q9UQ05 1017 aa16.38■□□□□ 0.21
HIF3A-215ENST00000533145 BAZ2BQ9UIF8 2168 aaKnown RBP16.37■□□□□ 0.21
HIF3A-215ENST00000533145 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
HIF3A-215ENST00000533145 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
HIF3A-215ENST00000533145 PLEKHA8P1O95397 391 aa16.37■□□□□ 0.21
HIF3A-215ENST00000533145 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-215ENST00000533145 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
HIF3A-215ENST00000533145 FDPSP14324 419 aaKnown RBP16.37■□□□□ 0.21
HIF3A-215ENST00000533145 GJB2P29033 226 aa16.37■□□□□ 0.21
HIF3A-215ENST00000533145 SSRP1Q08945 709 aaKnown RBP16.37■□□□□ 0.21
HIF3A-215ENST00000533145 FEZ1Q99689 392 aa16.37■□□□□ 0.21
HIF3A-215ENST00000533145 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
HIF3A-215ENST00000533145 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
HIF3A-215ENST00000533145 JAK2O60674 1132 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 MTMR2Q13614 643 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 RASGRP2Q7LDG7 609 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 ORC3Q9UBD5 711 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-215ENST00000533145 MTMR7Q9Y216 660 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 CNTNAP5Q8WYK1 1306 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 LOC285556D6RIA3 1793 aa16.36■□□□□ 0.21
HIF3A-215ENST00000533145 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 IRF6O14896 467 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 CYTH3O43739 400 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 CCDC96Q2M329 555 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 SLC35G1Q2M3R5 365 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 OPTNQ96CV9 577 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 MTMR8Q96EF0 704 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
HIF3A-215ENST00000533145 FRMPD2Q68DX3 1309 aaPredicted RBP16.35■□□□□ 0.21
HIF3A-215ENST00000533145 A0A0G2JLL6 359 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-215ENST00000533145 DEXIO95424 95 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 APLP1P51693 650 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 HTRA3P83110 453 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
HIF3A-215ENST00000533145 PKN1Q16512 942 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 TTBK2Q6IQ55 1244 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 PRRT2Q7Z6L0 340 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-215ENST00000533145 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
HIF3A-215ENST00000533145 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 PROCA1Q8NCQ7 364 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-215ENST00000533145 WASF1Q92558 559 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 PHKBQ93100 1093 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 OTUD5Q96G74 571 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 FEM1BQ9UK73 627 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-215ENST00000533145 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-215ENST00000533145 RLFQ13129 1914 aa16.34■□□□□ 0.21
HIF3A-215ENST00000533145 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 RAD21O60216 631 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 VCAM1P19320 739 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 PDCP20941 246 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 GJA5P36382 358 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 STAT2P52630 851 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 HMGCS2P54868 508 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
HIF3A-215ENST00000533145 COL13A1Q5TAT6 717 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms