RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 VGLL4Q14135 290 aa21.43■■□□□ 1.02
SMPD1-208ENST00000533123 GRM4Q14833 912 aa21.43■■□□□ 1.02
SMPD1-208ENST00000533123 PPP2R5BQ15173 497 aa21.43■■□□□ 1.02
SMPD1-208ENST00000533123 BAZ2BQ9UIF8 2168 aaKnown RBP21.42■■□□□ 1.02
SMPD1-208ENST00000533123 DOCK1Q14185 1865 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 F5H6K3 240 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 GADD45BO75293 160 aaPredicted RBP21.42■■□□□ 1.02
SMPD1-208ENST00000533123 PTPRAP18433 802 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 KIF5BP33176 963 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 GUCY1B3Q02153 619 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 KLRC3Q07444 240 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 ZYXQ15942 572 aaKnown RBP21.42■■□□□ 1.02
SMPD1-208ENST00000533123 CHADLQ6NUI6 762 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 MAP3K14Q99558 947 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 RBM28Q9NW13 759 aaKnown RBP21.42■■□□□ 1.02
SMPD1-208ENST00000533123 ORC3Q9UBD5 711 aaPredicted RBP21.42■■□□□ 1.02
SMPD1-208ENST00000533123 TMX2Q9Y320 296 aa21.42■■□□□ 1.02
SMPD1-208ENST00000533123 CPLX2Q6PUV4 134 aaKnown RBP21.41■■□□□ 1.02
SMPD1-208ENST00000533123 FRMPD2Q68DX3 1309 aaPredicted RBP21.41■■□□□ 1.02
SMPD1-208ENST00000533123 PARP1P09874 1014 aaKnown RBP21.41■■□□□ 1.02
SMPD1-208ENST00000533123 RESTQ13127 1097 aa21.41■■□□□ 1.02
SMPD1-208ENST00000533123 NOL9Q5SY16 702 aaKnown RBP21.41■■□□□ 1.02
SMPD1-208ENST00000533123 SLFN13Q68D06 897 aa21.41■■□□□ 1.02
SMPD1-208ENST00000533123 SPICE1Q8N0Z3 855 aa21.41■■□□□ 1.02
SMPD1-208ENST00000533123 TMEM87AQ8NBN3 555 aa21.41■■□□□ 1.02
SMPD1-208ENST00000533123 KIF3AQ9Y496 699 aa21.41■■□□□ 1.02
SMPD1-208ENST00000533123 PALM3A6NDB9 673 aaPredicted RBP21.4■■□□□ 1.02
SMPD1-208ENST00000533123 SNHG28P0DPA3 235 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 TMTC3Q6ZXV5 915 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 NBPF11Q86T75 865 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 SRBD1Q8N5C6 995 aaKnown RBP21.4■■□□□ 1.02
SMPD1-208ENST00000533123 CSADQ9Y600 493 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 SNCAIPQ9Y6H5 919 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 ZHX2Q9Y6X8 837 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 CDKL5O76039 1030 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 ITGBL1O95965 494 aaPredicted RBP21.4■■□□□ 1.02
SMPD1-208ENST00000533123 NDUFB10O96000 172 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 IFNAR1P17181 557 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 KIAA1755Q5JYT7 1200 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 OTUD7BQ6GQQ9 843 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 CAVIN1Q6NZI2 390 aaKnown RBP21.4■■□□□ 1.02
SMPD1-208ENST00000533123 ARMC9Q7Z3E5 817 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 GMCL1P1Q8NEA9 526 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 CLMNQ96JQ2 1002 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 FEZ1Q99689 392 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 CPVLQ9H3G5 476 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 GJB4Q9NTQ9 266 aa21.4■■□□□ 1.02
SMPD1-208ENST00000533123 UBE2Q2LH0YL09 131 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 SPP2Q13103 211 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 MAP3K11Q16584 847 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 TPRNQ4KMQ1 711 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 KCTD1Q719H9 257 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 ANKRD13AQ8IZ07 590 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 SLC26A6Q9BXS9 759 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 RBM27Q9P2N5 1060 aaKnown RBP21.39■■□□□ 1.01
SMPD1-208ENST00000533123 ISY1Q9ULR0 285 aaKnown RBP21.39■■□□□ 1.01
SMPD1-208ENST00000533123 OTOFQ9HC10 1997 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 KLRF2D3W0D1 207 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 SLC1A4P43007 532 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 NUP88Q99567 741 aaPredicted RBP21.39■■□□□ 1.01
SMPD1-208ENST00000533123 GPCPD1Q9NPB8 672 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 SYNPO2Q9UMS6 1093 aa21.39■■□□□ 1.01
SMPD1-208ENST00000533123 KIF3CO14782 793 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 CELF2O95319 508 aaKnown RBP21.38■■□□□ 1.01
SMPD1-208ENST00000533123 ZNF543Q08ER8 600 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 FUT2Q10981 343 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 CCDC96Q2M329 555 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 CNKSR2Q8WXI2 1034 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 AIFM3Q96NN9 605 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 SH2D4AQ9H788 454 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 ELP3Q9H9T3 547 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 GOPCQ9HD26 462 aa21.38■■□□□ 1.01
SMPD1-208ENST00000533123 DGKZQ13574 1117 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 ZNF280CQ8ND82 737 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 UBA5Q9GZZ9 404 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 VCPKMTQ9H867 229 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 AS3MTQ9HBK9 375 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 hCG_1642624A0A1W2PR95 340 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 TRIM75PA6NK02 468 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 USP17L10C9JJH3 530 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 GNAQP50148 359 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 SSRP1Q08945 709 aaKnown RBP21.37■■□□□ 1.01
SMPD1-208ENST00000533123 MTMR2Q13614 643 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 ASPRV1Q53RT3 343 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 TTBK2Q6IQ55 1244 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 PIBF1Q8WXW3 757 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 WDR18Q9BV38 432 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 PAPPA2Q9BXP8 1791 aa21.37■■□□□ 1.01
SMPD1-208ENST00000533123 CYTH3O43739 400 aa21.36■■□□□ 1.01
SMPD1-208ENST00000533123 FMNL1O95466 1100 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-208ENST00000533123 KRT85P78386 507 aa21.36■■□□□ 1.01
SMPD1-208ENST00000533123 SLC35G1Q2M3R5 365 aa21.36■■□□□ 1.01
SMPD1-208ENST00000533123 DCAF4Q8WV16 495 aa21.36■■□□□ 1.01
SMPD1-208ENST00000533123 GMCL1Q96IK5 515 aa21.36■■□□□ 1.01
SMPD1-208ENST00000533123 C8orf76Q96K31 380 aa21.36■■□□□ 1.01
SMPD1-208ENST00000533123 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
SMPD1-208ENST00000533123 V9GY48 417 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-208ENST00000533123 GPATCH4Q5T3I0 446 aaKnown RBP21.36■■□□□ 1.01
SMPD1-208ENST00000533123 TRIM22Q8IYM9 498 aa21.36■■□□□ 1.01
SMPD1-208ENST00000533123 KIAA1683Q9H0B3 1180 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms