RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 PUF60Q9UHX1 559 aaKnown RBP16.88■□□□□ 0.29
SSH3-210ENST00000532881 RCAN1P53805 252 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 PMS1P54277 932 aaKnown RBP16.88■□□□□ 0.29
SSH3-210ENST00000532881 KRT31Q15323 416 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 UTP14CQ5TAP6 766 aaKnown RBP16.88■□□□□ 0.29
SSH3-210ENST00000532881 CDKAL1Q5VV42 579 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 DZIP1Q86YF9 867 aaKnown RBP16.88■□□□□ 0.29
SSH3-210ENST00000532881 SETDB2Q96T68 719 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 GTPBP4Q9BZE4 634 aaKnown RBP16.88■□□□□ 0.29
SSH3-210ENST00000532881 SPATA31A5Q5VU36 1347 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 SPATA31A7Q8IWB4 1347 aa16.88■□□□□ 0.29
SSH3-210ENST00000532881 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
SSH3-210ENST00000532881 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 PPFIBP1Q86W92 1011 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 STX8Q9UNK0 236 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 CCP110O43303 1012 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 CYTH3O43739 400 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 DDAH1O94760 285 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 PNMA6AP0CW24 399 aaPredicted RBP16.87■□□□□ 0.29
SSH3-210ENST00000532881 USP5P45974 858 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 PPP2R3AQ06190 1150 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 INF2Q27J81 1249 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 PNMA1Q8ND90 353 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 TGFBRAP1Q8WUH2 860 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 ZCCHC17Q9NP64 241 aaKnown RBP16.87■□□□□ 0.29
SSH3-210ENST00000532881 FAM53CQ9NYF3 392 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 ADGRG1Q9Y653 693 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 A0A1B0GUL6 1792 aa16.87■□□□□ 0.29
SSH3-210ENST00000532881 ERICH4A6NGS2 130 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 PES1O00541 588 aaKnown RBP16.86■□□□□ 0.29
SSH3-210ENST00000532881 N4BP3O15049 544 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 SASH3O75995 380 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 PBX1P40424 430 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 PRCPP42785 496 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 PLA2G4AP47712 749 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 GPIHBP1Q8IV16 184 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 CCDC34Q96HJ3 373 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 GSDMAQ96QA5 445 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 KAT14Q9H8E8 782 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 MRFAP1Q9Y605 127 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 NKRFO15226 690 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSH3-210ENST00000532881 POLR3GO15318 223 aaPredicted RBP16.86■□□□□ 0.29
SSH3-210ENST00000532881 CALM1P0DP23 149 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 CALM2P0DP24 149 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 CALM3P0DP25 149 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 ERVK-24P63145 666 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 C4orf32Q8N8J7 132 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 IQUBQ8NA54 791 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 NELFBQ8WX92 580 aa16.86■□□□□ 0.29
SSH3-210ENST00000532881 TM4SF1P30408 202 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 TERF2Q15554 542 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 BLIDQ8IZY5 108 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 RASSF8Q8NHQ8 419 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 TRIM10Q9UDY6 481 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 MYO1BO43795 1136 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 ORC4O43929 436 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 MFAP3LO75121 409 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
SSH3-210ENST00000532881 FCHSD1Q86WN1 690 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 MKNK2Q9HBH9 465 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 VAT1LQ9HCJ6 419 aa16.85■□□□□ 0.29
SSH3-210ENST00000532881 CCDC175P0C221 793 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 ZNF569Q5MCW4 686 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 WWC2Q6AWC2 1192 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 CHP1Q99653 195 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 MYH8P13535 1937 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 RPN1P04843 607 aaKnown RBP16.84■□□□□ 0.29
SSH3-210ENST00000532881 NAALADL2Q58DX5 795 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 HPS3Q969F9 1004 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 NUP88Q99567 741 aaPredicted RBP16.84■□□□□ 0.29
SSH3-210ENST00000532881 CDCA7Q9BWT1 371 aaPredicted RBP16.84■□□□□ 0.29
SSH3-210ENST00000532881 ATP8A2Q9NTI2 1148 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 MAD2L2Q9UI95 211 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 EFCAB8A8MWE9 144 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 STAT6P42226 847 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 TMCO3Q6UWJ1 677 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 PARD6BQ9BYG5 372 aa16.84■□□□□ 0.29
SSH3-210ENST00000532881 SCN7AQ01118 1682 aa16.83■□□□□ 0.29
SSH3-210ENST00000532881 ZPR1O75312 459 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 ZRANB2O95218 330 aaKnown RBP eCLIP16.83■□□□□ 0.28
SSH3-210ENST00000532881 ERCC3P19447 782 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 GYS2P54840 703 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
SSH3-210ENST00000532881 C8orf37Q96NL8 207 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 SLF1Q9BQI6 1058 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
SSH3-210ENST00000532881 WNK3Q9BYP7 1800 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 KCNJ18B7U540 433 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 COPB1P53618 953 aaKnown RBP16.83■□□□□ 0.28
SSH3-210ENST00000532881 PAK1Q13153 545 aa16.83■□□□□ 0.28
SSH3-210ENST00000532881 KCNJ12Q14500 433 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms