RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 SPDYE16A6NNV3 312 aaPredicted RBP29.16■■■□□ 2.26
USP48-214ENST00000532737 PEX10O60683 326 aa29.16■■■□□ 2.26
USP48-214ENST00000532737 MCCP23508 829 aa29.16■■■□□ 2.26
USP48-214ENST00000532737 RASGRP2Q7LDG7 609 aa29.16■■■□□ 2.26
USP48-214ENST00000532737 ANKRD13CQ8N6S4 541 aa29.16■■■□□ 2.26
USP48-214ENST00000532737 GMCL1Q96IK5 515 aa29.16■■■□□ 2.26
USP48-214ENST00000532737 RBPJLQ9UBG7 517 aa29.16■■■□□ 2.26
USP48-214ENST00000532737 MTMR7Q9Y216 660 aa29.16■■■□□ 2.26
USP48-214ENST00000532737 FLOT1O75955 427 aa29.15■■■□□ 2.26
USP48-214ENST00000532737 DSG3P32926 999 aa29.15■■■□□ 2.26
USP48-214ENST00000532737 ADCK5Q3MIX3 580 aa29.15■■■□□ 2.26
USP48-214ENST00000532737 TXNRD2Q9NNW7 524 aa29.15■■■□□ 2.26
USP48-214ENST00000532737 HOXC10Q9NYD6 342 aa29.15■■■□□ 2.26
USP48-214ENST00000532737 SNX14Q9Y5W7 946 aa29.15■■■□□ 2.26
USP48-214ENST00000532737 IFIT3O14879 490 aaKnown RBP29.14■■■□□ 2.26
USP48-214ENST00000532737 SEC24BO95487 1268 aa29.14■■■□□ 2.26
USP48-214ENST00000532737 BMP3P12645 472 aa29.14■■■□□ 2.26
USP48-214ENST00000532737 CAP1Q01518 475 aa29.14■■■□□ 2.26
USP48-214ENST00000532737 C8orf34Q49A92 452 aa29.14■■■□□ 2.26
USP48-214ENST00000532737 NEK1Q96PY6 1258 aa29.14■■■□□ 2.26
USP48-214ENST00000532737 HPS5Q9UPZ3 1129 aa29.14■■■□□ 2.26
USP48-214ENST00000532737 PRC1O43663 620 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 MCM5P33992 734 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 SLC1A4P43007 532 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 KRT32Q14532 448 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 PKN2Q16513 984 aaKnown RBP29.13■■■□□ 2.25
USP48-214ENST00000532737 SAMD1Q6SPF0 538 aaPredicted RBP29.13■■■□□ 2.25
USP48-214ENST00000532737 LBX2Q6XYB7 198 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 CD99L2Q8TCZ2 262 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 KAT14Q9H8E8 782 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 MORF4L1Q9UBU8 362 aa29.13■■■□□ 2.25
USP48-214ENST00000532737 FAM110CQ1W6H9 321 aa29.12■■■□□ 2.25
USP48-214ENST00000532737 IFIT1BQ5T764 474 aaKnown RBP29.12■■■□□ 2.25
USP48-214ENST00000532737 PNMA1Q8ND90 353 aa29.12■■■□□ 2.25
USP48-214ENST00000532737 IGDCC4Q8TDY8 1250 aa29.12■■■□□ 2.25
USP48-214ENST00000532737 GTF3C2Q8WUA4 911 aaPredicted RBP29.12■■■□□ 2.25
USP48-214ENST00000532737 ATG4CQ96DT6 458 aa29.12■■■□□ 2.25
USP48-214ENST00000532737 PAGR1Q9BTK6 254 aa29.12■■■□□ 2.25
USP48-214ENST00000532737 SENP2Q9HC62 589 aa29.12■■■□□ 2.25
USP48-214ENST00000532737 GPHNQ9NQX3 736 aaPredicted RBP29.12■■■□□ 2.25
USP48-214ENST00000532737 CNMDO75829 334 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 ECM2O94769 699 aaPredicted RBP29.11■■■□□ 2.25
USP48-214ENST00000532737 SLC34A2O95436 690 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 LACTBP83111 547 aaPredicted RBP29.11■■■□□ 2.25
USP48-214ENST00000532737 TMEM67Q5HYA8 995 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 KCTD1Q719H9 257 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 DCAF4Q8WV16 495 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 ERO1AQ96HE7 468 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 PPP1R9AQ9ULJ8 1098 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 MYPNQ86TC9 1320 aa29.11■■■□□ 2.25
USP48-214ENST00000532737 PDHBP11177 359 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 CTGFP29279 349 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 SART3Q15020 963 aaKnown RBP29.1■■■□□ 2.25
USP48-214ENST00000532737 Q3C1V9 767 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 SLF1Q9BQI6 1058 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 ARHGAP39Q9C0H5 1083 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 BTBD7Q9P203 1132 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 FEM1BQ9UK73 627 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 ISY1Q9ULR0 285 aaKnown RBP29.1■■■□□ 2.25
USP48-214ENST00000532737 RABGAP1Q9Y3P9 1069 aa29.1■■■□□ 2.25
USP48-214ENST00000532737 ERICH2A1L162 156 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 TMEM232C9JQI7 657 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 SNHG28P0DPA3 235 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 WTAPQ15007 396 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 CCDC96Q2M329 555 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 GPRC5AQ8NFJ5 357 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 MTA3Q9BTC8 594 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 ADAMTS5Q9UNA0 930 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 RLFQ13129 1914 aa29.09■■■□□ 2.25
USP48-214ENST00000532737 EXOSC10Q01780 885 aaKnown RBP29.08■■■□□ 2.25
USP48-214ENST00000532737 DHX32Q7L7V1 743 aaKnown RBP29.08■■■□□ 2.25
USP48-214ENST00000532737 TMEM87BQ96K49 555 aa29.08■■■□□ 2.25
USP48-214ENST00000532737 JAKMIP1Q96N16 626 aaKnown RBP29.08■■■□□ 2.25
USP48-214ENST00000532737 SH2B2O14492 632 aaPredicted RBP29.07■■■□□ 2.24
USP48-214ENST00000532737 EIF5BO60841 1220 aaKnown RBP29.07■■■□□ 2.24
USP48-214ENST00000532737 ERVK-9P63128 1117 aa29.07■■■□□ 2.24
USP48-214ENST00000532737 ERVK-24P63145 666 aa29.07■■■□□ 2.24
USP48-214ENST00000532737 FRMPD2Q68DX3 1309 aaPredicted RBP29.07■■■□□ 2.24
USP48-214ENST00000532737 TTBK2Q6IQ55 1244 aa29.07■■■□□ 2.24
USP48-214ENST00000532737 PRPF38AQ8NAV1 312 aaKnown RBP29.07■■■□□ 2.24
USP48-214ENST00000532737 KIFC2Q96AC6 838 aa29.07■■■□□ 2.24
USP48-214ENST00000532737 LRRC2Q9BYS8 371 aa29.07■■■□□ 2.24
USP48-214ENST00000532737 LY9Q9HBG7 655 aa29.07■■■□□ 2.24
USP48-214ENST00000532737 GPCPD1Q9NPB8 672 aa29.07■■■□□ 2.24
USP48-214ENST00000532737 VWA5AO00534 786 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 CPA1P15085 419 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 PSMC4P43686 418 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 ZNF543Q08ER8 600 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 KIF22Q14807 665 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 TRIM47Q96LD4 638 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 TCEANC2Q96MN5 208 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 HTTP42858 3142 aa29.06■■■□□ 2.24
USP48-214ENST00000532737 PLA2G6O60733 806 aa29.05■■■□□ 2.24
USP48-214ENST00000532737 FAM160B2Q86V87 743 aa29.05■■■□□ 2.24
USP48-214ENST00000532737 MB21D1Q8N884 522 aa29.05■■■□□ 2.24
USP48-214ENST00000532737 CHURC1Q8WUH1 139 aa29.05■■■□□ 2.24
USP48-214ENST00000532737 WDR19Q8NEZ3 1342 aa29.04■■■□□ 2.24
USP48-214ENST00000532737 HMGB1P09429 215 aaKnown RBP29.04■■■□□ 2.24
USP48-214ENST00000532737 GOLGA8HP0CJ92 632 aa29.04■■■□□ 2.24
USP48-214ENST00000532737 STAT2P52630 851 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms