RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RAD51AP2Q09MP3 1159 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 CCDC155Q8N6L0 562 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 TBC1D7Q9P0N9 293 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 VPS18Q9P253 973 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 DNM2P50570 870 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 B4DLN1 442 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 BACH1O14867 736 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 CFBP00751 764 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 RPN1P04843 607 aaKnown RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 UIMC1Q96RL1 719 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 DESI2Q9BSY9 194 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 ALDH8A1Q9H2A2 487 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 PPP2R2CQ9Y2T4 447 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 FRMPD2Q68DX3 1309 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 KDM3AQ9Y4C1 1321 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 IBSPP21815 317 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 FRMPD1Q5SYB0 1578 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 IFT81Q8WYA0 676 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 FAM207AQ9NSI2 230 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 IVLP07476 585 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 ASIC2Q16515 512 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 ZNF215Q9UL58 517 aaPredicted RBP17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 PCDHA12Q9UN75 941 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 CEMIPQ8WUJ3 1361 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 SNAP23O00161 211 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 IGSF3O75054 1194 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 POLD1P28340 1107 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 SP4Q02446 784 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 ZMYND15Q9H091 742 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 MROH2AA6NES4 1674 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 PPLO60437 1756 aa17.05■□□□□ 0.32
PCDHA3-202ENST00000532566 STX10O60499 249 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 EZRP15311 586 aaKnown RBP17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 DIP2AQ14689 1571 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 CYP2D7A0A087X1C5 515 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 NEBLO76041 1014 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 SCNN1DP51172 638 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 TBC1D10CQ8IV04 446 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 WDR19Q8NEZ3 1342 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 NUCKS1Q9H1E3 243 aaKnown RBP17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 TMEM110-MUSTN1A8MSY1 372 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 MCTP2Q6DN12 878 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 PCDHA4Q9UN74 947 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 ABCC12Q96J65 1359 aa17.04■□□□□ 0.32
PCDHA3-202ENST00000532566 ACTN2P35609 894 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 DLGAP5Q15398 846 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 ZBTB9Q96C00 473 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 GJB4Q9NTQ9 266 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 APBA3O96018 575 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 MB21D2Q8IYB1 491 aaPredicted RBP17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 RGS22Q8NE09 1264 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 LAD1O00515 517 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 KLHL30Q0D2K2 578 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 DOK7Q18PE1 504 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 CFAP58Q5T655 872 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 C8orf74Q6P047 294 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 RRAGAQ7L523 313 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 SYNCQ9H7C4 482 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 MAGEF1Q9HAY2 307 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 SMTNP53814 917 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 CCDC91Q7Z6B0 441 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 NLGN1Q8N2Q7 840 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 STAG1Q8WVM7 1258 aa17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
PCDHA3-202ENST00000532566 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 BBOX1O75936 387 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 MECOMQ03112 1051 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 RASGRP4Q8TDF6 673 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 IFIH1Q9BYX4 1025 aaKnown RBP17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 NLRC4Q9NPP4 1024 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 TNFAIP3P21580 790 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 DDX12PQ92771 950 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 BRIP1Q9BX63 1249 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 CUEDC2Q9H467 287 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 PCDHB6Q9Y5E3 794 aa17.02■□□□□ 0.32
PCDHA3-202ENST00000532566 GCNT3O95395 438 aa17.02■□□□□ 0.31
PCDHA3-202ENST00000532566 SERPINB2P05120 415 aa17.02■□□□□ 0.31
PCDHA3-202ENST00000532566 ERCC6LQ2NKX8 1250 aa17.02■□□□□ 0.31
PCDHA3-202ENST00000532566 CERKLQ49MI3 558 aaPredicted RBP17.02■□□□□ 0.31
PCDHA3-202ENST00000532566 MYCT1Q8N699 235 aa17.02■□□□□ 0.31
PCDHA3-202ENST00000532566 CHURC1Q8WUH1 139 aa17.02■□□□□ 0.31
PCDHA3-202ENST00000532566 MRPL44Q9H9J2 332 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms