RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ANKRD2Q9GZV1 360 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 MTFR1LQ9H019 292 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 ARMT1Q9H993 441 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 BATF3Q9NR55 127 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 KLC4Q9NSK0 619 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 LRRD1A4D1F6 860 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 GOLGA8KD6RF30 607 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 NPR1P16066 1061 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 LACTBP83111 547 aaPredicted RBP7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 GUCY1B3Q02153 619 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 SND1Q7KZF4 910 aaKnown RBP eCLIP7.59□□□□□ -1.196e-8■■■■□ 21.9
TGFBR3-209ENST00000532540 KAZALD1Q96I82 304 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 BRIP1Q9BX63 1249 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 SLIT3O75094 1523 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 TCP10L2B9ZVM9 353 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 YEATS4O95619 227 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 VAV2P52735 878 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 SLMAPQ14BN4 828 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 SAFBQ15424 915 aaKnown RBP eCLIP7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 PPP1R7Q15435 360 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 CAPZA3Q96KX2 299 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 EYA3Q99504 573 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 NUP88Q99567 741 aaPredicted RBP7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 TSC22D3Q99576 134 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 ACTR5Q9H9F9 607 aaPredicted RBP7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 ETAA1Q9NY74 926 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 ATRNO75882 1429 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 E7EVH7 732 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 CAND2O75155 1236 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 ZRANB2O95218 330 aaKnown RBP eCLIP7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 CCZ1BP86790 482 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 CCZ1P86791 482 aaPredicted RBP7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 HLTFQ14527 1009 aaKnown RBP eCLIP7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 ZYXQ15942 572 aaKnown RBP7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC38Q502W7 563 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 LRRC31Q6UY01 552 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 CDC37L1Q7L3B6 337 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 MAPKAPK5Q8IW41 473 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 SDR42E1Q8WUS8 393 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 SGSM3Q96HU1 749 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 FUT8Q9BYC5 575 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 MKNK2Q9HBH9 465 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 SLC4A4Q9Y6R1 1079 aa7.59□□□□□ -1.2
TGFBR3-209ENST00000532540 ABCC12Q96J65 1359 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 POLRMTO00411 1230 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 SNUPNO95149 360 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 MBD4O95243 580 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 MKRN3Q13064 507 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 SCARF1Q14162 830 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 TBC1D10BQ4KMP7 808 aaPredicted RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 C11orf57Q6ZUT1 292 aaPredicted RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 ZKSCAN3Q9BRR0 538 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 NAA15Q9BXJ9 866 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 TAOK3Q9H2K8 898 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 MCM9Q9NXL9 1143 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 AKR1B15C9JRZ8 316 aaPredicted RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 PRDX5P30044 214 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 ATP1A2P50993 1020 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 WDR78Q5VTH9 848 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 FAM114A1Q8IWE2 563 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 SPATA5Q8NB90 893 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC47Q96A33 483 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 OSBPL5Q9H0X9 879 aaPredicted RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 VCXQ9H320 206 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 KCNQ5Q9NR82 932 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 AP5Z1O43299 807 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 E4F1Q66K89 784 aaPredicted RBP7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 KLHL10Q6JEL2 608 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 KCNG4Q8TDN1 519 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 FBF1Q8TES7 1133 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 GUCA1BQ9UMX6 200 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 STX8Q9UNK0 236 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 SNX14Q9Y5W7 946 aa7.58□□□□□ -1.2
TGFBR3-209ENST00000532540 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 BBOX1O75936 387 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 SYKP43405 635 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 MTX1Q13505 466 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 SLC30A9Q6PML9 568 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 ZBTB10Q96DT7 871 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 OSBPL9Q96SU4 736 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 NACAP1Q9BZK3 213 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 CHCHD3Q9NX63 227 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 HPDP32754 393 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 SPA17Q15506 151 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC93Q567U6 631 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC125Q86Z20 511 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 CACNA2D3Q8IZS8 1091 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 IGSF22Q8N9C0 903 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 SPAG5Q96R06 1193 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 DESI2Q9BSY9 194 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 KIF9Q9HAQ2 790 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 CD248Q9HCU0 757 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 MON2Q7Z3U7 1717 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 LTN1O94822 1766 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 STX10O60499 249 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 USO1O60763 962 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 CLTAP09496 248 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms