RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 PAFAH1B1P43034 410 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 FBXL16Q8N461 479 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 CALML4Q96GE6 196 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 SAR1BQ9Y6B6 198 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 G3V3G9 751 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 ACTN4O43707 911 aaKnown RBP12.73□□□□□ -0.37
NXF1-211ENST00000531709 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
NXF1-211ENST00000531709 CYP2C19P33261 490 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 MRPS25P82663 173 aaKnown RBP12.73□□□□□ -0.37
NXF1-211ENST00000531709 DCAF8Q5TAQ9 597 aa12.73□□□□□ -0.37
NXF1-211ENST00000531709 TBC1D8O95759 1140 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 MCM3P25205 808 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 CYP27A1Q02318 531 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 NALCNQ8IZF0 1738 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 A0A1B0GTH6 734 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 B4DLN1 442 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 ATP8B1O43520 1251 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 PARP1P09874 1014 aaKnown RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 RNASE9P60153 205 aaKnown RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 ALX1Q15699 326 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 CCDC87Q9NVE4 849 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 TFR2Q9UP52 801 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 CCNT1O60563 726 aaKnown RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 CKAP4Q07065 602 aaKnown RBP12.72□□□□□ -0.37
NXF1-211ENST00000531709 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 DYMQ7RTS9 669 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 BLIDQ8IZY5 108 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 CHP1Q99653 195 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 RASSF4Q9H2L5 321 aa12.72□□□□□ -0.37
NXF1-211ENST00000531709 NFAT5O94916 1531 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 LTN1O94822 1766 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 PP2D1A8MPX8 630 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 TRIM14Q14142 442 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 DDB1Q16531 1140 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
NXF1-211ENST00000531709 ANKRD13CQ8N6S4 541 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 TRIM10Q9UDY6 481 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 SASH3O75995 380 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 IVLP07476 585 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 TXKP42681 527 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 AMPD3Q01432 767 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 WHAMMP3Q1A5X7 153 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 TSPYL1Q9H0U9 437 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 ABHD10Q9NUJ1 306 aa12.71□□□□□ -0.37
NXF1-211ENST00000531709 ADD3Q9UEY8 706 aaKnown RBP12.71□□□□□ -0.37
NXF1-211ENST00000531709 PRPF3O43395 683 aaKnown RBP12.71□□□□□ -0.38
NXF1-211ENST00000531709 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.38
NXF1-211ENST00000531709 CASP8Q14790 479 aa12.71□□□□□ -0.38
NXF1-211ENST00000531709 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.38
NXF1-211ENST00000531709 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.38
NXF1-211ENST00000531709 HSD3B7Q9H2F3 369 aa12.71□□□□□ -0.38
NXF1-211ENST00000531709 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.71□□□□□ -0.38
NXF1-211ENST00000531709 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.38
NXF1-211ENST00000531709 TACC1O75410 805 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 NDUFA10O95299 355 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 CYP2D6P10635 497 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 CCDC40Q4G0X9 1142 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 TCP11X2Q5H9J9 407 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 NLRP3Q96P20 1036 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 HIBADHP31937 336 aaKnown RBP12.7□□□□□ -0.38
NXF1-211ENST00000531709 IL6STP40189 918 aaPredicted RBP12.7□□□□□ -0.38
NXF1-211ENST00000531709 PRCPP42785 496 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 PARP10Q53GL7 1025 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 H7C1D1 291 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 CRKLP46109 303 aaKnown RBP12.7□□□□□ -0.38
NXF1-211ENST00000531709 VSNL1P62760 191 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 FAM107BQ9H098 131 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 BMP2KQ9NSY1 1161 aaPredicted RBP12.7□□□□□ -0.38
NXF1-211ENST00000531709 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 ABCC12Q96J65 1359 aa12.7□□□□□ -0.38
NXF1-211ENST00000531709 ZPR1O75312 459 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 GYPCP04921 128 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 TUBB4BP68371 445 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
NXF1-211ENST00000531709 C2CD5Q86YS7 1000 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 CPVLQ9H3G5 476 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 FAM204AQ9H8W3 233 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
NXF1-211ENST00000531709 TECP42680 631 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 TUBB2AQ13885 445 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 AFAP1L1Q8TED9 768 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 IFT81Q8WYA0 676 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 TUBB2BQ9BVA1 445 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 A0A087X0B3 334 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 TTC26A0AVF1 554 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 CLSTN1O94985 981 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms