RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 TMEM106CQ9BVX2 250 aa17.09■□□□□ 0.33
FOXR1-202ENST00000531539 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
FOXR1-202ENST00000531539 RAD50Q92878 1312 aa17.09■□□□□ 0.33
FOXR1-202ENST00000531539 PLIN4Q96Q06 1357 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 PCP11498 1178 aaKnown RBP17.08■□□□□ 0.32
FOXR1-202ENST00000531539 ELNP15502 786 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 CYP2B6P20813 491 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 MCCP23508 829 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 IRF5Q13568 498 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 MB21D1Q8N884 522 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 GMCL1P1Q8NEA9 526 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 ESR2Q92731 530 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 ZNF333Q96JL9 665 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 MOV10L1Q9BXT6 1211 aaKnown RBP17.08■□□□□ 0.32
FOXR1-202ENST00000531539 TCP11L1Q9NUJ3 509 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 PPP4R2Q9NY27 417 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
FOXR1-202ENST00000531539 KDM4AO75164 1064 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 BMP3P12645 472 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 KIAA1211Q6ZU35 1233 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
FOXR1-202ENST00000531539 SLAIN1Q8ND83 568 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 SLF1Q9BQI6 1058 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 ZKSCAN3Q9BRR0 538 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 SPATC1LQ9H0A9 340 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 SYNPO2Q9UMS6 1093 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 ADAMTS5Q9UNA0 930 aa17.07■□□□□ 0.32
FOXR1-202ENST00000531539 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
FOXR1-202ENST00000531539 NEDD4P46934 1319 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 TMEM232C9JQI7 657 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 VWA5AO00534 786 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 SLC1A4P43007 532 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 UBXN2AP68543 259 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 TMEM132BQ14DG7 1078 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 MTFR1Q15390 333 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 NCAPG2Q86XI2 1143 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 PXYLP1Q8TE99 480 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 KIFC2Q96AC6 838 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 TMEM47Q9BQJ4 181 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 FEM1BQ9UK73 627 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 IVNS1ABPQ9Y6Y0 642 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
FOXR1-202ENST00000531539 DOCK3Q8IZD9 2030 aa17.06■□□□□ 0.32
FOXR1-202ENST00000531539 MGAMO43451 1857 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 B4E1Z4 1266 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 ZBED4O75132 1171 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
FOXR1-202ENST00000531539 ERCC3P19447 782 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 PTPREP23469 700 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 STAT3P40763 770 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 RGS19P49795 217 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 IKQ13123 557 aaPredicted RBP17.05■□□□□ 0.32
FOXR1-202ENST00000531539 MORN1Q5T089 497 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 ERICH6BQ5W0A0 696 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 TTC14Q96N46 770 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 KRT23Q9C075 422 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 ZSWIM5Q9P217 1185 aa17.05■□□□□ 0.32
FOXR1-202ENST00000531539 GREB1LQ9C091 1923 aaPredicted RBP17.05■□□□□ 0.32
FOXR1-202ENST00000531539 SLC15A5A6NIM6 579 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 RGS2P41220 211 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 NOVP48745 357 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 KCTD1Q719H9 257 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 GMCL1Q96IK5 515 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 CNNM2Q9H8M5 875 aa17.04■□□□□ 0.32
FOXR1-202ENST00000531539 STRNO43815 780 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 SLC25A27O95847 323 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 INHAP05111 366 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 CYP21A2P08686 494 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 CCL5P13501 91 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
FOXR1-202ENST00000531539 MAP2K5Q13163 448 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 SHCBP1Q8NEM2 672 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 SOCS4Q8WXH5 440 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 USP6NLQ92738 828 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 MROH8Q9H579 483 aa17.03■□□□□ 0.32
FOXR1-202ENST00000531539 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.32
FOXR1-202ENST00000531539 MLLT1Q03111 559 aaPredicted RBP17.02■□□□□ 0.32
FOXR1-202ENST00000531539 TRDNQ13061 729 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 CCDC96Q2M329 555 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 CASC1Q6TDU7 716 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 DPP9Q86TI2 863 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 REPS2Q8NFH8 660 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.32
FOXR1-202ENST00000531539 UNC93B1Q9H1C4 597 aa17.02■□□□□ 0.32
FOXR1-202ENST00000531539 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms