RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 JAK2O60674 1132 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 CTDNEP1O95476 244 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 HMGCS2P54868 508 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 PPATQ06203 517 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 MKRN3Q13064 507 aaKnown RBP22.16■■□□□ 1.14
SMPD1-205ENST00000531303 CPLX2Q6PUV4 134 aaKnown RBP22.16■■□□□ 1.14
SMPD1-205ENST00000531303 DCAF4Q8WV16 495 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 DDX11Q96FC9 970 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 MAP3K14Q99558 947 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 SYNPO2Q9UMS6 1093 aa22.16■■□□□ 1.14
SMPD1-205ENST00000531303 PALM3A6NDB9 673 aaPredicted RBP22.15■■□□□ 1.14
SMPD1-205ENST00000531303 KLRF2D3W0D1 207 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 IRF6O14896 467 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 SNHG28P0DPA3 235 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 ZNF543Q08ER8 600 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 FAM83BQ5T0W9 1011 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 TTBK2Q6IQ55 1244 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 TMTC3Q6ZXV5 915 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 PIBF1Q8WXW3 757 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 PHKBQ93100 1093 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 EMILIN3Q9NT22 766 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.15■■□□□ 1.14
SMPD1-205ENST00000531303 NID2Q14112 1375 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 BMP3P12645 472 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 USP14P54578 494 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 FSTL1Q12841 308 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 PPP2R5BQ15173 497 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 ASPRV1Q53RT3 343 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 SRBD1Q8N5C6 995 aaKnown RBP22.15■■□□□ 1.14
SMPD1-205ENST00000531303 NSUN7Q8NE18 718 aaKnown RBP22.15■■□□□ 1.14
SMPD1-205ENST00000531303 GMCL1Q96IK5 515 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 UBA5Q9GZZ9 404 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 SMC3Q9UQE7 1217 aa22.15■■□□□ 1.14
SMPD1-205ENST00000531303 PTPDC1A2A3K4 754 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 UNCXA6NJT0 531 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 C19orf81C9J6K1 198 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 SLC16A2P36021 539 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 GJA5P36382 358 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 GNAQP50148 359 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 IKQ13123 557 aaPredicted RBP22.14■■□□□ 1.13
SMPD1-205ENST00000531303 PPIL2Q13356 520 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 NTRK3Q16288 839 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 SAMD1Q6SPF0 538 aaPredicted RBP22.14■■□□□ 1.13
SMPD1-205ENST00000531303 NBPF11Q86T75 865 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 SLC26A6Q9BXS9 759 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 VAT1LQ9HCJ6 419 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 TMOD4Q9NZQ9 345 aa22.14■■□□□ 1.13
SMPD1-205ENST00000531303 ABT1Q9ULW3 272 aaKnown RBP22.14■■□□□ 1.13
SMPD1-205ENST00000531303 PTPRFP10586 1907 aa22.13■■□□□ 1.13
SMPD1-205ENST00000531303 INTS4Q96HW7 963 aaKnown RBP22.13■■□□□ 1.13
SMPD1-205ENST00000531303 WNK4Q96J92 1243 aa22.13■■□□□ 1.13
SMPD1-205ENST00000531303 MYH6P13533 1939 aa22.13■■□□□ 1.13
SMPD1-205ENST00000531303 hCG_1642624A0A1W2PR95 340 aa22.12■■□□□ 1.13
SMPD1-205ENST00000531303 TMEM88BA6NKF7 163 aa22.12■■□□□ 1.13
SMPD1-205ENST00000531303 TMEM232C9JQI7 657 aa22.12■■□□□ 1.13
SMPD1-205ENST00000531303 CDKL5O76039 1030 aa22.12■■□□□ 1.13
SMPD1-205ENST00000531303 SSRP1Q08945 709 aaKnown RBP22.12■■□□□ 1.13
SMPD1-205ENST00000531303 GPATCH4Q5T3I0 446 aaKnown RBP22.12■■□□□ 1.13
SMPD1-205ENST00000531303 GADL1Q6ZQY3 521 aa22.12■■□□□ 1.13
SMPD1-205ENST00000531303 SAPCD2Q86UD0 394 aa22.12■■□□□ 1.13
SMPD1-205ENST00000531303 LPAR1Q92633 364 aa22.12■■□□□ 1.13
SMPD1-205ENST00000531303 LLPHQ9BRT6 129 aaKnown RBP22.12■■□□□ 1.13
SMPD1-205ENST00000531303 IFNAR1P17181 557 aa22.11■■□□□ 1.13
SMPD1-205ENST00000531303 VCAM1P19320 739 aa22.11■■□□□ 1.13
SMPD1-205ENST00000531303 GJB2P29033 226 aa22.11■■□□□ 1.13
SMPD1-205ENST00000531303 ZNF157P51786 506 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-205ENST00000531303 LZTS2Q9BRK4 669 aa22.11■■□□□ 1.13
SMPD1-205ENST00000531303 TANGO6Q9C0B7 1094 aa22.11■■□□□ 1.13
SMPD1-205ENST00000531303 V9GY48 417 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-205ENST00000531303 CXCL11O14625 94 aa22.1■■□□□ 1.13
SMPD1-205ENST00000531303 FOSBP53539 338 aa22.1■■□□□ 1.13
SMPD1-205ENST00000531303 FUT2Q10981 343 aa22.1■■□□□ 1.13
SMPD1-205ENST00000531303 SLC35G1Q2M3R5 365 aa22.1■■□□□ 1.13
SMPD1-205ENST00000531303 RPAP3Q9H6T3 665 aaPredicted RBP22.1■■□□□ 1.13
SMPD1-205ENST00000531303 ORC3Q9UBD5 711 aaPredicted RBP22.1■■□□□ 1.13
SMPD1-205ENST00000531303 CNTNAP5Q8WYK1 1306 aa22.1■■□□□ 1.13
SMPD1-205ENST00000531303 WDR46O15213 610 aaKnown RBP22.09■■□□□ 1.13
SMPD1-205ENST00000531303 CYTH3O43739 400 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 AKAP17AQ02040 695 aaKnown RBP22.09■■□□□ 1.13
SMPD1-205ENST00000531303 TRIM22Q8IYM9 498 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 SMARCC2Q8TAQ2 1214 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 KCNH4Q9UQ05 1017 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 TLL2Q9Y6L7 1015 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 A0A0G2JLL6 359 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-205ENST00000531303 FMNL1O95466 1100 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-205ENST00000531303 SNAPC2Q13487 334 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 SH3D19Q5HYK7 790 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 SPRYD7Q5W111 196 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 RGMBQ6NW40 437 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 PRRT2Q7Z6L0 340 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-205ENST00000531303 HOMER1Q86YM7 354 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 ADGRF4Q8IZF3 695 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 FAM184AQ8NB25 1140 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 FBXO28Q9NVF7 368 aa22.09■■□□□ 1.13
SMPD1-205ENST00000531303 FDPSP14324 419 aaKnown RBP22.08■■□□□ 1.12
SMPD1-205ENST00000531303 STAT2P52630 851 aa22.08■■□□□ 1.12
SMPD1-205ENST00000531303 SNAP25P60880 206 aa22.08■■□□□ 1.12
SMPD1-205ENST00000531303 HMGN5P82970 282 aaKnown RBP22.08■■□□□ 1.12
SMPD1-205ENST00000531303 SYDE2Q5VT97 1194 aa22.08■■□□□ 1.12
SMPD1-205ENST00000531303 PAXIP1Q6ZW49 1069 aaPredicted RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms