RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	SMCR8	Q8TEV9	937 aa	Predicted RBP	24.93	■■□□□ 1.58
PABPC4-225	ENST00000531243	WBP1L	Q9NX94	342 aa		24.93	■■□□□ 1.58
PABPC4-225	ENST00000531243	TRPA1	O75762	1119 aa		24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	RBM25	P49756	843 aa	Known RBP	24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	FAM83B	Q5T0W9	1011 aa		24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	IL17RA	Q96F46	866 aa		24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	CFHR5	Q9BXR6	569 aa		24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	ASCC2	Q9H1I8	757 aa	Predicted RBP	24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	LY9	Q9HBG7	655 aa		24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	HOXC10	Q9NYD6	342 aa		24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	MTMR7	Q9Y216	660 aa		24.92	■■□□□ 1.58
PABPC4-225	ENST00000531243	PARP14	Q460N5	1801 aa		24.91	■■□□□ 1.58
PABPC4-225	ENST00000531243	MYPN	Q86TC9	1320 aa		24.91	■■□□□ 1.58
PABPC4-225	ENST00000531243	FLOT1	O75955	427 aa		24.91	■■□□□ 1.58
PABPC4-225	ENST00000531243	COG2	Q14746	738 aa		24.91	■■□□□ 1.58
PABPC4-225	ENST00000531243	CCDC96	Q2M329	555 aa		24.91	■■□□□ 1.58
PABPC4-225	ENST00000531243	FEM1B	Q9UK73	627 aa		24.91	■■□□□ 1.58
PABPC4-225	ENST00000531243	CALM1	P0DP23	149 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	CALM2	P0DP24	149 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	CALM3	P0DP25	149 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	GCLC	P48506	637 aa	Predicted RBP	24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	IK	Q13123	557 aa	Predicted RBP	24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	KIAA1755	Q5JYT7	1200 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	GPATCH4	Q5T3I0	446 aa	Known RBP	24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	FAM160B2	Q86V87	743 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	FBXL16	Q8N461	479 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	IL27	Q8NEV9	243 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	CHURC1	Q8WUH1	139 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	LRRC2	Q9BYS8	371 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	SLC12A7	Q9Y666	1083 aa		24.9	■■□□□ 1.58
PABPC4-225	ENST00000531243	DDAH1	O94760	285 aa		24.89	■■□□□ 1.58
PABPC4-225	ENST00000531243	PDHB	P11177	359 aa		24.89	■■□□□ 1.58
PABPC4-225	ENST00000531243	STAT2	P52630	851 aa		24.89	■■□□□ 1.58
PABPC4-225	ENST00000531243		Q6ZUG5	572 aa		24.89	■■□□□ 1.58
PABPC4-225	ENST00000531243	SGMS1	Q86VZ5	419 aa		24.89	■■□□□ 1.58
PABPC4-225	ENST00000531243	PDRG1	Q9NUG6	133 aa		24.89	■■□□□ 1.58
PABPC4-225	ENST00000531243	TLR2	O60603	784 aa		24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	PARP1	P09874	1014 aa	Known RBP	24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	SNHG28	P0DPA3	235 aa		24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	CYP2C8	P10632	490 aa		24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	CRHR2	Q13324	411 aa		24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	ASPRV1	Q53RT3	343 aa		24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	TCEANC2	Q96MN5	208 aa		24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	MAP3K14	Q99558	947 aa		24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	CTDP1	Q9Y5B0	961 aa	Predicted RBP	24.88	■■□□□ 1.57
PABPC4-225	ENST00000531243	TMEM232	C9JQI7	657 aa		24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	PLA2G6	O60733	806 aa		24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	FDX1	P10109	184 aa		24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	CPA1	P15085	419 aa		24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	ANKRD1	Q15327	319 aa		24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	ZNF654	Q8IZM8	581 aa		24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	PRPF38A	Q8NAV1	312 aa	Known RBP	24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	CTCFL	Q8NI51	663 aa	Predicted RBP	24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	NUP88	Q99567	741 aa	Predicted RBP	24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	P2RX7	Q99572	595 aa	Known RBP	24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	SLF1	Q9BQI6	1058 aa		24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	UPF3B	Q9BZI7	483 aa	Known RBP	24.87	■■□□□ 1.57
PABPC4-225	ENST00000531243	DSG3	P32926	999 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	KIF5B	P33176	963 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	HERVK_113	P62684	666 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	ZNF543	Q08ER8	600 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	LBX2	Q6XYB7	198 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	KCTD1	Q719H9	257 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	MB21D1	Q8N884	522 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	NUP133	Q8WUM0	1156 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	RLF	Q13129	1914 aa		24.86	■■□□□ 1.57
PABPC4-225	ENST00000531243	TBC1D8	O95759	1140 aa		24.85	■■□□□ 1.57
PABPC4-225	ENST00000531243	BRF1	Q92994	677 aa		24.85	■■□□□ 1.57
PABPC4-225	ENST00000531243	TBC1D32	Q96NH3	1257 aa		24.85	■■□□□ 1.57
PABPC4-225	ENST00000531243	AGXT2	Q9BYV1	514 aa		24.85	■■□□□ 1.57
PABPC4-225	ENST00000531243	PPP1R9A	Q9ULJ8	1098 aa		24.85	■■□□□ 1.57
PABPC4-225	ENST00000531243	RCAN1	P53805	252 aa		24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	TROAP	Q12815	778 aa		24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	COL9A3	Q14050	684 aa	Predicted RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	NOM1	Q5C9Z4	860 aa	Known RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	SAMD1	Q6SPF0	538 aa	Predicted RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	CHMP4C	Q96CF2	233 aa		24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	SENP2	Q9HC62	589 aa		24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	GPCPD1	Q9NPB8	672 aa		24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	GPHN	Q9NQX3	736 aa	Predicted RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	NAP1L2	Q9ULW6	460 aa	Predicted RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	COL11A1	P12107	1806 aa	Predicted RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	FRMPD2	Q68DX3	1309 aa	Predicted RBP	24.84	■■□□□ 1.57
PABPC4-225	ENST00000531243	SPDYE16	A6NNV3	312 aa	Predicted RBP	24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	ZBTB43	O43298	467 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	ZBED4	O75132	1171 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	GNAQ	P50148	359 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	NEK4	P51957	841 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	GRM4	Q14833	912 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	PPP2R5B	Q15173	497 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	KIFC2	Q96AC6	838 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	RABGAP1	Q9Y3P9	1069 aa		24.83	■■□□□ 1.57
PABPC4-225	ENST00000531243	MYH6	P13533	1939 aa		24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243	KLF18	A0A0U1RQI7	1052 aa		24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243	HSPA1A	P0DMV8	641 aa	Known RBP	24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243	HSPA1B	P0DMV9	641 aa	Known RBP	24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243	RABEP1	Q15276	862 aa		24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243	APOA5	Q6Q788	366 aa		24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243	BTNL9	Q6UXG8	535 aa		24.82	■■□□□ 1.56

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms