RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 DSG3P32926 999 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 ADCYAP1R1P41586 468 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 EPHB4P54760 987 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 LRRC41Q15345 812 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 SLC9C2Q5TAH2 1124 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 CERS3Q8IU89 383 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 ITPRIPQ8IWB1 547 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 SPICE1Q8N0Z3 855 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 SHCBP1Q8NEM2 672 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 BADQ92934 168 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 ATG4CQ96DT6 458 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 MAML3Q96JK9 1138 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 ASB2Q96Q27 587 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 CABP5Q9NP86 173 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 MCM9Q9NXL9 1143 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
CHMP4A-205ENST00000531158 CYP2D7A0A087X1C5 515 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 STRNO43815 780 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 POLR3DP05423 398 aaPredicted RBP11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 TMEM132BQ14DG7 1078 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 DPP9Q86TI2 863 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 IL27Q8NEV9 243 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 PPM1EQ8WY54 764 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 ARMT1Q9H993 441 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 PRDM5Q9NQX1 630 aaPredicted RBP11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 HOXC10Q9NYD6 342 aa11.15□□□□□ -0.62
CHMP4A-205ENST00000531158 ROBO3Q96MS0 1386 aa11.15□□□□□ -0.63
CHMP4A-205ENST00000531158 GOLIM4O00461 696 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 TAL1P17542 331 aaPredicted RBP11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 SMAD3P84022 425 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 C1orf53Q5VUE5 145 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 TMED8Q6PL24 325 aaPredicted RBP11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 TMEM179Q6ZVK1 233 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 SIRT2Q8IXJ6 389 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 ARRDC4Q8NCT1 418 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 RHPN1Q8TCX5 695 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 FBXO28Q9NVF7 368 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 PHF24Q9UPV7 400 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
CHMP4A-205ENST00000531158 KBTBD13C9JR72 458 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 FLOT1O75955 427 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 PGK2P07205 417 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 MRPS5P82675 430 aaKnown RBP11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 TLE2Q04725 743 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 PLS1Q14651 629 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 NCAPG2Q86XI2 1143 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 REPS2Q8NFH8 660 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 LRFN3Q9BTN0 628 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 MROH8Q9H579 483 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 THEGQ9P2T0 379 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 ZNF214Q9UL59 606 aaPredicted RBP11.13□□□□□ -0.63
CHMP4A-205ENST00000531158 MBD4O95243 580 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 PGK1P00558 417 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 ICA1Q05084 483 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 GRIN2CQ14957 1233 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 TTF1Q15361 905 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 ZNF792Q3KQV3 632 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 MB21D1Q8N884 522 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 TRANK1O15050 2925 aa11.12□□□□□ -0.63
CHMP4A-205ENST00000531158 XIRP2A4UGR9 3374 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 A0A1W2PQ45 241 aaPredicted RBP11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 A0A1W2PQY0 241 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 APBB1O00213 710 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 WDR46O15213 610 aaKnown RBP11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 ADCY6O43306 1168 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 ZNF865P0CJ78 1059 aaPredicted RBP11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 FCER1AP12319 257 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 ADD2P35612 726 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 CDK8P49336 464 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 C12orf60Q5U649 245 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 ERC1Q8IUD2 1116 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 TINF2Q9BSI4 451 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 SWAP70Q9UH65 585 aa11.11□□□□□ -0.63
CHMP4A-205ENST00000531158 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
CHMP4A-205ENST00000531158 VWA5AO00534 786 aa11.1□□□□□ -0.63
CHMP4A-205ENST00000531158 KIAA0355O15063 1070 aa11.1□□□□□ -0.63
CHMP4A-205ENST00000531158 CLTBP09497 229 aa11.1□□□□□ -0.63
CHMP4A-205ENST00000531158 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
CHMP4A-205ENST00000531158 CCSAPQ6IQ19 270 aaPredicted RBP11.1□□□□□ -0.63
CHMP4A-205ENST00000531158 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
CHMP4A-205ENST00000531158 C16orf86Q6ZW13 317 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms