RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 ENOX1Q8TC92 643 aaKnown RBP5.96□□□□□ -1.46
CD44-233ENST00000531141 SYTL5Q8TDW5 730 aaPredicted RBP5.96□□□□□ -1.46
CD44-233ENST00000531141 UBXN4Q92575 508 aa5.96□□□□□ -1.46
CD44-233ENST00000531141 DRC1Q96MC2 740 aa5.96□□□□□ -1.46
CD44-233ENST00000531141 HAUS7Q99871 368 aa5.96□□□□□ -1.46
CD44-233ENST00000531141 TRIM55Q9BYV6 548 aa5.96□□□□□ -1.46
CD44-233ENST00000531141 CBFA2T2O43439 604 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 SIGLEC6O43699 453 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 ZNF143P52747 638 aaPredicted RBP5.95□□□□□ -1.46
CD44-233ENST00000531141 RAB33AQ14088 237 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 DDR2Q16832 855 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 CLEC16AQ2KHT3 1053 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 GAB4Q2WGN9 574 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 DCAF15Q66K64 600 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 C6orf15Q6UXA7 325 aaPredicted RBP5.95□□□□□ -1.46
CD44-233ENST00000531141 TSPYL5Q86VY4 417 aaPredicted RBP5.95□□□□□ -1.46
CD44-233ENST00000531141 DHX38Q92620 1227 aaKnown RBP5.95□□□□□ -1.46
CD44-233ENST00000531141 HDAC8Q9BY41 377 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 PRDM14Q9GZV8 571 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 GBP3Q9H0R5 595 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 DUSP15Q9H1R2 295 aaPredicted RBP5.95□□□□□ -1.46
CD44-233ENST00000531141 PCDHB10Q9UN67 800 aa5.95□□□□□ -1.46
CD44-233ENST00000531141 SHISA3A0PJX4 238 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 B2RBV5 119 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 U2SURPO15042 1029 aaKnown RBP5.94□□□□□ -1.46
CD44-233ENST00000531141 HYAL3O43820 417 aaPredicted RBP5.94□□□□□ -1.46
CD44-233ENST00000531141 TP53P04637 393 aaPredicted RBP5.94□□□□□ -1.46
CD44-233ENST00000531141 ITGA4P13612 1032 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 IKZF1Q13422 519 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 SNW1Q13573 536 aaKnown RBP5.94□□□□□ -1.46
CD44-233ENST00000531141 TCEAL1Q15170 157 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 SOGA3Q5TF21 947 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 HEATR6Q6AI08 1181 aaKnown RBP5.94□□□□□ -1.46
CD44-233ENST00000531141 KIAA1211LQ6NV74 962 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 TMC3Q7Z5M5 1100 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 WFDC3Q8IUB2 231 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 FAM178BQ8IXR5 827 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 DAGLBQ8NCG7 672 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 AGBL5Q8NDL9 886 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 UBE2FQ969M7 185 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 KLHL25Q9H0H3 589 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 ATP13A1Q9HD20 1204 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 ZFP64Q9NPA5 681 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 FAM86C1Q9NVL1 165 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 WHRNQ9P202 907 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 PPP1R1BQ9UD71 204 aaPredicted RBP5.94□□□□□ -1.46
CD44-233ENST00000531141 FBXL21Q9UKT6 434 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 FHOD1Q9Y613 1164 aa5.94□□□□□ -1.46
CD44-233ENST00000531141 BTBD11A6QL63 1104 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 PRAMEF1O95521 474 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 WNT11O96014 354 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 EPHX1P07099 455 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 TPP2P29144 1249 aaPredicted RBP5.93□□□□□ -1.46
CD44-233ENST00000531141 ZNF574Q6ZN55 896 aaPredicted RBP5.93□□□□□ -1.46
CD44-233ENST00000531141 NFXL1Q6ZNB6 911 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 ZNF655Q8N720 491 aaPredicted RBP5.93□□□□□ -1.46
CD44-233ENST00000531141 CELF2-AS1Q8N7Q2 184 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 GP6Q9HCN6 339 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 PAK6Q9NQU5 681 aaPredicted RBP5.93□□□□□ -1.46
CD44-233ENST00000531141 CHST7Q9NS84 486 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 GFOD1Q9NXC2 390 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 DUSP13Q9UII6 198 aa5.93□□□□□ -1.46
CD44-233ENST00000531141 ANKRD34BA5PLL1 514 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 DDAH1O94760 285 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 CD8BP10966 210 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 CD247P20963 164 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 LTKP29376 864 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 RBL2Q08999 1139 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 SERINC3Q13530 473 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 DSCC1Q9BVC3 393 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 LMCD1Q9NZU5 365 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 SUSD2Q9UGT4 822 aa5.92□□□□□ -1.46
CD44-233ENST00000531141 A0A087WZG4 1122 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 RBAK-RBAKDNI3L0D1 243 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 SUSD5O60279 629 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 GJB6O95452 261 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 FUT4P22083 530 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 CD96P40200 585 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 BNIP3Q12983 259 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 NOL9Q5SY16 702 aaKnown RBP5.91□□□□□ -1.46
CD44-233ENST00000531141 MRM1Q6IN84 353 aaKnown RBP5.91□□□□□ -1.46
CD44-233ENST00000531141 RNF111Q6ZNA4 994 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 EEPD1Q7L9B9 569 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 SPRED2Q7Z698 418 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 TCTN2Q96GX1 697 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 EPN3Q9H201 632 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 SIRPGQ9P1W8 387 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 MSRB2Q9Y3D2 182 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 ZNF451Q9Y4E5 1061 aa5.91□□□□□ -1.46
CD44-233ENST00000531141 ADAMTS4O75173 837 aa5.9□□□□□ -1.46
CD44-233ENST00000531141 PPM1BO75688 479 aa5.9□□□□□ -1.46
CD44-233ENST00000531141 ESR1P03372 595 aa5.9□□□□□ -1.46
CD44-233ENST00000531141 GSNP06396 782 aa5.9□□□□□ -1.46
CD44-233ENST00000531141 ENDOUP21128 410 aaKnown RBP5.9□□□□□ -1.46
CD44-233ENST00000531141 ZNF445P59923 1031 aa5.9□□□□□ -1.46
CD44-233ENST00000531141 ZP2Q05996 745 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms