RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.33
CAPN1-221ENST00000531068 TRIB2Q92519 343 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 CEP95Q96GE4 821 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 HTATIP2Q9BUP3 242 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 PPP1R9AQ9ULJ8 1098 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 ADAMTS5Q9UNA0 930 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 TSPY2A6NKD2 308 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 VWA5AO00534 786 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 FGAP02671 866 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 HSPD1P10809 573 aaKnown RBP13.01□□□□□ -0.33
CAPN1-221ENST00000531068 NMIQ13287 307 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-221ENST00000531068 GRB14Q14449 540 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 MAP3K21Q5TCX8 1036 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 NCAPG2Q86XI2 1143 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 GMCL1P1Q8NEA9 526 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 SHISA4Q96DD7 197 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 DIAPH3Q9NSV4 1193 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-221ENST00000531068 PHIPQ8WWQ0 1821 aa13.01□□□□□ -0.33
CAPN1-221ENST00000531068 MYO5AQ9Y4I1 1855 aaKnown RBP13.01□□□□□ -0.33
CAPN1-221ENST00000531068 FOCADQ5VW36 1801 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 A0A0D9SFI3 127 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 FOXP2O15409 715 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 ORC4O43929 436 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 ZBED4O75132 1171 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 FARP2O94887 1054 aaPredicted RBP13□□□□□ -0.33
CAPN1-221ENST00000531068 NDUFB10O96000 172 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
CAPN1-221ENST00000531068 FCER1AP12319 257 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
CAPN1-221ENST00000531068 STAT3P40763 770 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 CTDSPL2Q05D32 466 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 TRIM32Q13049 653 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 RIOX2Q8IUF8 465 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 ANKLE1Q8NAG6 615 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 DPF3Q92784 378 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 SLF1Q9BQI6 1058 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 BACH2Q9BYV9 841 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 FEM1BQ9UK73 627 aa13□□□□□ -0.33
CAPN1-221ENST00000531068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.33
CAPN1-221ENST00000531068 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 ZMYM6O95789 1325 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
CAPN1-221ENST00000531068 FGRP09769 529 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 FDX1P10109 184 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 ADORA2AP29274 412 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 NT5C2P49902 561 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 CACNB2Q08289 660 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-221ENST00000531068 KCTD2Q14681 263 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 SLFN13Q68D06 897 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 CHURC1Q8WUH1 139 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 FBXO28Q9NVF7 368 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 MYH1P12882 1939 aa12.99□□□□□ -0.33
CAPN1-221ENST00000531068 PLIN4Q96Q06 1357 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 ZNF213O14771 459 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 BMP3P12645 472 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
CAPN1-221ENST00000531068 SLC1A4P43007 532 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 CCL14Q16627 93 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 BMP2KLQ5H9B9 411 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 OLFML2BQ68BL8 750 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
CAPN1-221ENST00000531068 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-221ENST00000531068 GMCL1Q96IK5 515 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-221ENST00000531068 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 RNF41Q9H4P4 317 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-221ENST00000531068 OGDHLQ9ULD0 1010 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 STX8Q9UNK0 236 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
CAPN1-221ENST00000531068 DDX60LQ5H9U9 1706 aaKnown RBP12.98□□□□□ -0.33
CAPN1-221ENST00000531068 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 MSCO60682 206 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 FAM160B2Q86V87 743 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 LRRC47Q8N1G4 583 aaKnown RBP12.97□□□□□ -0.33
CAPN1-221ENST00000531068 NPLOC4Q8TAT6 608 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 KIFC2Q96AC6 838 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 MMP19Q99542 508 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 INCENPQ9NQS7 918 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 TCP11L1Q9NUJ3 509 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
CAPN1-221ENST00000531068 ZNF214Q9UL59 606 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-221ENST00000531068 ISY1Q9ULR0 285 aaKnown RBP12.97□□□□□ -0.33
CAPN1-221ENST00000531068 CDK5RAP2Q96SN8 1893 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 TMEM232C9JQI7 657 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 MCCP23508 829 aa12.96□□□□□ -0.33
CAPN1-221ENST00000531068 ANP32AP39687 249 aaKnown RBP12.96□□□□□ -0.33
CAPN1-221ENST00000531068 OAZ1P54368 228 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms