RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TNKSO95271 1327 aa17.96■□□□□ 0.46
CCS-206ENST00000530961 IFIT3O14879 490 aaKnown RBP17.95■□□□□ 0.46
CCS-206ENST00000530961 C17orf99Q6UX52 265 aa17.95■□□□□ 0.46
CCS-206ENST00000530961 P2RX7Q99572 595 aaKnown RBP17.95■□□□□ 0.46
CCS-206ENST00000530961 TANGO6Q9C0B7 1094 aa17.95■□□□□ 0.46
CCS-206ENST00000530961 PSMA5P28066 241 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 SLC1A4P43007 532 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 HERVK_113P62684 666 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 SEC23AQ15436 765 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
CCS-206ENST00000530961 LBX2Q6XYB7 198 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 TMTC2Q8N394 836 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 KAT14Q9H8E8 782 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 SNX14Q9Y5W7 946 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 DOCK1Q14185 1865 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 MYPNQ86TC9 1320 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 ADGRA2Q96PE1 1338 aa17.94■□□□□ 0.46
CCS-206ENST00000530961 BAZ2AQ9UIF9 1905 aaKnown RBP17.94■□□□□ 0.46
CCS-206ENST00000530961 PRC1O43663 620 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 FKTNO75072 461 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 FLOT1O75955 427 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 BMP3P12645 472 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 ANTXR2P58335 489 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 SP3Q02447 781 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 TMEM67Q5HYA8 995 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 FAM83BQ5T0W9 1011 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
CCS-206ENST00000530961 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 DCAF4Q8WV16 495 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 CPA4Q9UI42 421 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 WDR19Q8NEZ3 1342 aa17.93■□□□□ 0.46
CCS-206ENST00000530961 POTEFA5A3E0 1075 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 PLA2G6O60733 806 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 BCRP11274 1271 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 DSG3P32926 999 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 WTAPQ15007 396 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 FAM110CQ1W6H9 321 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 CHST3Q7LGC8 479 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 MB21D1Q8N884 522 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 PNMA1Q8ND90 353 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
CCS-206ENST00000530961 SPDYE16A6NNV3 312 aaPredicted RBP17.91■□□□□ 0.46
CCS-206ENST00000530961 SNHG28P0DPA3 235 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 ANAPC15P60006 121 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 EXOSC10Q01780 885 aaKnown RBP17.91■□□□□ 0.46
CCS-206ENST00000530961 FAM160B2Q86V87 743 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 PRPF38AQ8NAV1 312 aaKnown RBP17.91■□□□□ 0.46
CCS-206ENST00000530961 CHURC1Q8WUH1 139 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 JAKMIP1Q96N16 626 aaKnown RBP17.91■□□□□ 0.46
CCS-206ENST00000530961 NUP88Q99567 741 aaPredicted RBP17.91■□□□□ 0.46
CCS-206ENST00000530961 SLF1Q9BQI6 1058 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 MORF4L1Q9UBU8 362 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 PPP1R9AQ9ULJ8 1098 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 RABGAP1Q9Y3P9 1069 aa17.91■□□□□ 0.46
CCS-206ENST00000530961 SEC24BO95487 1268 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 FDX1P10109 184 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 PDHBP11177 359 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 LIFRP42702 1097 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 ARHGEF6Q15052 776 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 GPATCH4Q5T3I0 446 aaKnown RBP17.9■□□□□ 0.46
CCS-206ENST00000530961 BLOC1S2Q6QNY1 142 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 ANKRD13CQ8N6S4 541 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 GPRC5AQ8NFJ5 357 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 ERO1AQ96HE7 468 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 TM6SF1Q9BZW5 370 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 RBPJLQ9UBG7 517 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 ADAMTS5Q9UNA0 930 aa17.9■□□□□ 0.46
CCS-206ENST00000530961 TMEM232C9JQI7 657 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 SH2B2O14492 632 aaPredicted RBP17.89■□□□□ 0.45
CCS-206ENST00000530961 STAT2P52630 851 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 KIF22Q14807 665 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 CCDC96Q2M329 555 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 CATIPQ7Z7H3 387 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 LY9Q9HBG7 655 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 FBXO28Q9NVF7 368 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 ISY1Q9ULR0 285 aaKnown RBP17.89■□□□□ 0.45
CCS-206ENST00000530961 MTMR7Q9Y216 660 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 COL6A3P12111 3177 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 CEP290O15078 2479 aa17.89■□□□□ 0.45
CCS-206ENST00000530961 CCNA1P78396 465 aa17.88■□□□□ 0.45
CCS-206ENST00000530961 LACTBP83111 547 aaPredicted RBP17.88■□□□□ 0.45
CCS-206ENST00000530961 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
CCS-206ENST00000530961 BTNL9Q6UXG8 535 aa17.88■□□□□ 0.45
CCS-206ENST00000530961 KCTD1Q719H9 257 aa17.88■□□□□ 0.45
CCS-206ENST00000530961 IL17RAQ96F46 866 aa17.88■□□□□ 0.45
CCS-206ENST00000530961 ZSWIM6Q9HCJ5 1215 aa17.88■□□□□ 0.45
CCS-206ENST00000530961 LAMB1P07942 1786 aa17.88■□□□□ 0.45
CCS-206ENST00000530961 CCDC69A6NI79 296 aa17.87■□□□□ 0.45
CCS-206ENST00000530961 VWA5AO00534 786 aa17.87■□□□□ 0.45
CCS-206ENST00000530961 PARP1P09874 1014 aaKnown RBP17.87■□□□□ 0.45
CCS-206ENST00000530961 CASTP20810 708 aaKnown RBP17.87■□□□□ 0.45
CCS-206ENST00000530961 RPS6KB1P23443 525 aa17.87■□□□□ 0.45
CCS-206ENST00000530961 ERVK-9P63128 1117 aa17.87■□□□□ 0.45
CCS-206ENST00000530961 ERVK-24P63145 666 aa17.87■□□□□ 0.45
CCS-206ENST00000530961 IKQ13123 557 aaPredicted RBP17.87■□□□□ 0.45
CCS-206ENST00000530961 COL9A3Q14050 684 aaPredicted RBP17.87■□□□□ 0.45
CCS-206ENST00000530961 ASPRV1Q53RT3 343 aa17.87■□□□□ 0.45
CCS-206ENST00000530961 POTEEQ6S8J3 1075 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms