RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PPP4R3BQ5MIZ7 849 aa19.53■□□□□ 0.72
BRCA2-204ENST00000530893 BAG1Q99933 345 aaPredicted RBP19.53■□□□□ 0.72
BRCA2-204ENST00000530893 M0R2N6 131 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 IL1R1P14778 569 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 MCM7P33993 719 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 CDKAL1Q5VV42 579 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 PRR5LQ6MZQ0 368 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 HOMER1Q86YM7 354 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 RTFDC1Q9BY42 306 aaPredicted RBP19.52■□□□□ 0.72
BRCA2-204ENST00000530893 RMND1Q9NWS8 449 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 ZNF215Q9UL58 517 aaPredicted RBP19.52■□□□□ 0.72
BRCA2-204ENST00000530893 BAZ2BQ9UIF8 2168 aaKnown RBP19.52■□□□□ 0.72
BRCA2-204ENST00000530893 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 LAD1O00515 517 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 GTPBP6O43824 516 aaPredicted RBP19.52■□□□□ 0.72
BRCA2-204ENST00000530893 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 DIXDC1Q155Q3 683 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 PDXDC2PQ6P474 469 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 SYT10Q6XYQ8 523 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 SLF2Q8IX21 1173 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 TC2NQ8N9U0 490 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 TGFBRAP1Q8WUH2 860 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 FEZ1Q99689 392 aa19.52■□□□□ 0.72
BRCA2-204ENST00000530893 GPR75-ASB3A0A0A6YYF3 556 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 PPP1R3GB7ZBB8 358 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 ST5P78524 1137 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 C4orf32Q8N8J7 132 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 CD209Q9NNX6 404 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 CDK5RAP2Q96SN8 1893 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 CCDC194A0A1B0GVG4 234 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 PALM3A6NDB9 673 aaPredicted RBP19.51■□□□□ 0.71
BRCA2-204ENST00000530893 VEGFAP15692 232 aaPredicted RBP19.51■□□□□ 0.71
BRCA2-204ENST00000530893 CD44P16070 742 aaKnown RBP19.51■□□□□ 0.71
BRCA2-204ENST00000530893 FILIP1LQ4L180 1135 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 HSP90AA4PQ58FG1 418 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 APTXQ7Z2E3 356 aaKnown RBP19.51■□□□□ 0.71
BRCA2-204ENST00000530893 STAG2Q8N3U4 1231 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 FAM163AQ96GL9 167 aaPredicted RBP19.51■□□□□ 0.71
BRCA2-204ENST00000530893 RBM17Q96I25 401 aaKnown RBP19.51■□□□□ 0.71
BRCA2-204ENST00000530893 BARHL2Q9NY43 387 aa19.51■□□□□ 0.71
BRCA2-204ENST00000530893 DDX60LQ5H9U9 1706 aaKnown RBP19.5■□□□□ 0.71
BRCA2-204ENST00000530893 BBOX1O75936 387 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 RASA1P20936 1047 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 SMARCA1P28370 1054 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 GPSM2P81274 684 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 IL17AQ16552 155 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 CCDC93Q567U6 631 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 C16orf86Q6ZW13 317 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 REXO1L1PQ8IX06 675 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 CCDC12Q8WUD4 166 aaPredicted RBP19.5■□□□□ 0.71
BRCA2-204ENST00000530893 GJD4Q96KN9 370 aaPredicted RBP19.5■□□□□ 0.71
BRCA2-204ENST00000530893 PANX2Q96RD6 677 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 SPZ1Q9BXG8 430 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 PODXL2Q9NZ53 605 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 GGA1Q9UJY5 639 aa19.5■□□□□ 0.71
BRCA2-204ENST00000530893 UBR3Q6ZT12 1888 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 USP17L3A6NCW0 530 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 USP17L4A6NCW7 530 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 MYL1P05976 194 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 FAM182BQ5T319 152 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 USP17L1Q7RTZ2 530 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 TBC1D22AQ8WUA7 517 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 TMEM47Q9BQJ4 181 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 NAA15Q9BXJ9 866 aaKnown RBP19.49■□□□□ 0.71
BRCA2-204ENST00000530893 SRRTQ9BXP5 876 aaKnown RBP19.49■□□□□ 0.71
BRCA2-204ENST00000530893 ADD3Q9UEY8 706 aaKnown RBP19.49■□□□□ 0.71
BRCA2-204ENST00000530893 PPP2R2CQ9Y2T4 447 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 ONECUT3O60422 494 aaPredicted RBP19.49■□□□□ 0.71
BRCA2-204ENST00000530893 UFL1O94874 794 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 BTDP43251 543 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 SPAG1Q07617 926 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 SLC4A8Q2Y0W8 1093 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 TRIM65Q6PJ69 517 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 GPKOWQ92917 476 aaPredicted RBP eCLIP19.49■□□□□ 0.71
BRCA2-204ENST00000530893 RWDD2AQ9UIY3 292 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 STX8Q9UNK0 236 aa19.49■□□□□ 0.71
BRCA2-204ENST00000530893 FAM205AQ6ZU69 1335 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.48■□□□□ 0.71
BRCA2-204ENST00000530893 PRPHP41219 470 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 GRIK5Q16478 980 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 ZNF658Q5TYW1 1059 aaPredicted RBP19.48■□□□□ 0.71
BRCA2-204ENST00000530893 WWC2Q6AWC2 1192 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 KLHL10Q6JEL2 608 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 DTHD1Q6ZMT9 781 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 MAPKAPK5Q8IW41 473 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 NEDD1Q8NHV4 660 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 PCDHA6Q9UN73 950 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 PCDHA8Q9Y5H6 950 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 ITIH6Q6UXX5 1313 aa19.48■□□□□ 0.71
BRCA2-204ENST00000530893 AKR1B15C9JRZ8 316 aaPredicted RBP19.47■□□□□ 0.71
BRCA2-204ENST00000530893 STXBP3O00186 592 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 PBX1P40424 430 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 LRRC10BA6NIK2 292 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 CYTH3O43739 400 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 CASP1P29466 404 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 HOXA10P31260 410 aaPredicted RBP19.47■□□□□ 0.71
BRCA2-204ENST00000530893 CDK8P49336 464 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 TYW1BQ6NUM6 668 aa19.47■□□□□ 0.71
BRCA2-204ENST00000530893 TEX11Q8IYF3 940 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 532.9 ms