RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 CCDC91Q7Z6B0 441 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 TADA2BQ86TJ2 420 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 BRIP1Q9BX63 1249 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 ZSWIM4Q9H7M6 989 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 SEMA3EO15041 775 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 SHC4Q6S5L8 630 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 NOSTRINQ8IVI9 506 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 CRACR2BQ8N4Y2 399 aaPredicted RBP21.68■■□□□ 1.06
LTBP3-217ENST00000530785 JMYQ8N9B5 988 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 FANCBQ8NB91 859 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 SUGCTQ9HAC7 445 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 MED4Q9NPJ6 270 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 TFCP2L1Q9NZI6 479 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 CDC23Q9UJX2 597 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 KCNJ14Q9UNX9 436 aa21.68■■□□□ 1.06
LTBP3-217ENST00000530785 A0A087WUV0 522 aaPredicted RBP21.67■■□□□ 1.06
LTBP3-217ENST00000530785 BTBD18B2RXH4 712 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 CASP8Q14790 479 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 ISM2Q6H9L7 571 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 NSUN4Q96CB9 384 aaKnown RBP21.67■■□□□ 1.06
LTBP3-217ENST00000530785 RTCBQ9Y3I0 505 aaKnown RBP21.67■■□□□ 1.06
LTBP3-217ENST00000530785 TNRC6CQ9HCJ0 1690 aaKnown RBP21.67■■□□□ 1.06
LTBP3-217ENST00000530785 CCDC196A0A1B0GTZ2 297 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 PTPN21Q16825 1174 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 HSP90B2PQ58FF3 399 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 TPTE2Q6XPS3 522 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 DIS3L2Q8IYB7 885 aaKnown RBP21.67■■□□□ 1.06
LTBP3-217ENST00000530785 HPSEQ9Y251 543 aa21.67■■□□□ 1.06
LTBP3-217ENST00000530785 TAF1LQ8IZX4 1826 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 ANKRD65E5RJM6 399 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 DEXIO95424 95 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 MECOMQ03112 1051 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 TUBB2AQ13885 445 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 KARSQ15046 597 aaKnown RBP21.66■■□□□ 1.06
LTBP3-217ENST00000530785 ARHGEF1Q92888 912 aaKnown RBP21.66■■□□□ 1.06
LTBP3-217ENST00000530785 TUBB2BQ9BVA1 445 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 MRPL44Q9H9J2 332 aaKnown RBP21.66■■□□□ 1.06
LTBP3-217ENST00000530785 HIBADHP31937 336 aaKnown RBP21.66■■□□□ 1.06
LTBP3-217ENST00000530785 SYKP43405 635 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 ENAHQ8N8S7 591 aaPredicted RBP21.66■■□□□ 1.06
LTBP3-217ENST00000530785 GPATCH11Q8N954 259 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 CLIC6Q96NY7 704 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 ANKRD2Q9GZV1 360 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 FANCLQ9NW38 375 aa21.66■■□□□ 1.06
LTBP3-217ENST00000530785 PUF60Q9UHX1 559 aaKnown RBP21.66■■□□□ 1.06
LTBP3-217ENST00000530785 PDS5AQ29RF7 1337 aaKnown RBP21.65■■□□□ 1.06
LTBP3-217ENST00000530785 PRDM1O75626 825 aa21.65■■□□□ 1.06
LTBP3-217ENST00000530785 GBP3Q9H0R5 595 aa21.65■■□□□ 1.06
LTBP3-217ENST00000530785 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.65■■□□□ 1.06
LTBP3-217ENST00000530785 SAFBQ15424 915 aaKnown RBP eCLIP21.65■■□□□ 1.06
LTBP3-217ENST00000530785 E2F4Q16254 413 aa21.65■■□□□ 1.06
LTBP3-217ENST00000530785 DNAJC21Q5F1R6 531 aaKnown RBP21.65■■□□□ 1.06
LTBP3-217ENST00000530785 WWC2Q6AWC2 1192 aa21.65■■□□□ 1.06
LTBP3-217ENST00000530785 ZSCAN10Q96SZ4 725 aaPredicted RBP21.65■■□□□ 1.06
LTBP3-217ENST00000530785 FAM204AQ9H8W3 233 aa21.65■■□□□ 1.06
LTBP3-217ENST00000530785 MAST2Q6P0Q8 1798 aa21.64■■□□□ 1.06
LTBP3-217ENST00000530785 MYH6P13533 1939 aa21.64■■□□□ 1.06
LTBP3-217ENST00000530785 PRDX5P30044 214 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 TM4SF1P30408 202 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 RESP18Q5W5W9 173 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 CCDC102AQ96A19 550 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 DESI2Q9BSY9 194 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 LY75O60449 1722 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 TRIM37O94972 964 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 TOB1P50616 345 aaPredicted RBP21.64■■□□□ 1.05
LTBP3-217ENST00000530785 VSNL1P62760 191 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 EVX2Q03828 476 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 TXNRD3Q86VQ6 643 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 IRX2Q9BZI1 471 aaPredicted RBP21.64■■□□□ 1.05
LTBP3-217ENST00000530785 ACBD3Q9H3P7 528 aa21.64■■□□□ 1.05
LTBP3-217ENST00000530785 AATFQ9NY61 560 aaKnown RBP eCLIP21.64■■□□□ 1.05
LTBP3-217ENST00000530785 FAM237AA0A1B0GTK4 181 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 USP17L12C9JPN9 530 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 USP17L21D6R901 530 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 TUBBP07437 444 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 SPECC1LQ69YQ0 1117 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 FAM196AQ6ZSG2 479 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 PDILTQ8N807 584 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 FAM107BQ9H098 131 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 LAMB1P07942 1786 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 CLGNO14967 610 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 CCDC175P0C221 793 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 ADKP55263 362 aaKnown RBP21.63■■□□□ 1.05
LTBP3-217ENST00000530785 FOXP1Q9H334 677 aaPredicted RBP21.63■■□□□ 1.05
LTBP3-217ENST00000530785 DLEC1Q9Y238 1755 aa21.63■■□□□ 1.05
LTBP3-217ENST00000530785 FGRP09769 529 aa21.62■■□□□ 1.05
LTBP3-217ENST00000530785 NR5A1Q13285 461 aa21.62■■□□□ 1.05
LTBP3-217ENST00000530785 JAG2Q9Y219 1238 aa21.62■■□□□ 1.05
LTBP3-217ENST00000530785 AARSP49588 968 aaKnown RBP eCLIP21.62■■□□□ 1.05
LTBP3-217ENST00000530785 CT47A1Q5JQC4 288 aaPredicted RBP21.62■■□□□ 1.05
LTBP3-217ENST00000530785 IFIT1BQ5T764 474 aaKnown RBP21.62■■□□□ 1.05
LTBP3-217ENST00000530785 SLC51AQ86UW1 340 aa21.62■■□□□ 1.05
LTBP3-217ENST00000530785 RNF26Q9BY78 433 aaPredicted RBP21.62■■□□□ 1.05
LTBP3-217ENST00000530785 CXorf56Q9H5V9 222 aa21.62■■□□□ 1.05
LTBP3-217ENST00000530785 LRRIQ3A6PVS8 624 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-217ENST00000530785 PHACTR2O75167 634 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 CCDC172P0C7W6 258 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 OLFM4Q6UX06 510 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 OXER1Q8TDS5 423 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 IRS2Q9Y4H2 1338 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms