RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 TSHZ3Q63HK5 1081 aa24.93■■□□□ 1.58
TSPAN4-219ENST00000530404 OLFML2BQ68BL8 750 aa24.93■■□□□ 1.58
TSPAN4-219ENST00000530404 Q7L0L9 218 aa24.93■■□□□ 1.58
TSPAN4-219ENST00000530404 MB21D1Q8N884 522 aa24.93■■□□□ 1.58
TSPAN4-219ENST00000530404 ZSCAN25Q6NSZ9 544 aa24.92■■□□□ 1.58
TSPAN4-219ENST00000530404 DNM1LO00429 736 aa24.91■■□□□ 1.58
TSPAN4-219ENST00000530404 MYCNP04198 464 aaPredicted RBP24.91■■□□□ 1.58
TSPAN4-219ENST00000530404 MROH8Q9H579 483 aa24.91■■□□□ 1.58
TSPAN4-219ENST00000530404 A0A0C4DFX4 3053 aa24.91■■□□□ 1.58
TSPAN4-219ENST00000530404 LRIT3Q3SXY7 679 aa24.9■■□□□ 1.58
TSPAN4-219ENST00000530404 KANSL2Q9H9L4 492 aa24.9■■□□□ 1.58
TSPAN4-219ENST00000530404 ECHDC1Q9NTX5 307 aa24.9■■□□□ 1.58
TSPAN4-219ENST00000530404 RTP1P59025 263 aa24.89■■□□□ 1.58
TSPAN4-219ENST00000530404 FAM83BQ5T0W9 1011 aa24.89■■□□□ 1.58
TSPAN4-219ENST00000530404 DEFB123Q8N688 67 aa24.89■■□□□ 1.58
TSPAN4-219ENST00000530404 MAML3Q96JK9 1138 aa24.89■■□□□ 1.58
TSPAN4-219ENST00000530404 STRBPQ96SI9 672 aaKnown RBP24.89■■□□□ 1.58
TSPAN4-219ENST00000530404 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.89■■□□□ 1.58
TSPAN4-219ENST00000530404 ARPP21Q9UBL0 812 aaPredicted RBP24.89■■□□□ 1.58
TSPAN4-219ENST00000530404 PGK2P07205 417 aa24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 FCER1AP12319 257 aa24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 OSBP2Q969R2 916 aa24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 MMP19Q99542 508 aa24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 NUP88Q99567 741 aaPredicted RBP24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 GOPCQ9HD26 462 aa24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 SLC5A4Q9NY91 659 aa24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 ATP11BQ9Y2G3 1177 aa24.88■■□□□ 1.57
TSPAN4-219ENST00000530404 GSG1L2A8MUP6 293 aa24.87■■□□□ 1.57
TSPAN4-219ENST00000530404 MINDY4BA8MYZ0 360 aa24.87■■□□□ 1.57
TSPAN4-219ENST00000530404 SEPT4O43236 478 aa24.87■■□□□ 1.57
TSPAN4-219ENST00000530404 ABRAQ8N0Z2 381 aa24.87■■□□□ 1.57
TSPAN4-219ENST00000530404 PPP1R9AQ9ULJ8 1098 aa24.87■■□□□ 1.57
TSPAN4-219ENST00000530404 ADAMTS5Q9UNA0 930 aa24.87■■□□□ 1.57
TSPAN4-219ENST00000530404 KBTBD13C9JR72 458 aa24.86■■□□□ 1.57
TSPAN4-219ENST00000530404 SLC25A27O95847 323 aa24.86■■□□□ 1.57
TSPAN4-219ENST00000530404 RASA1P20936 1047 aa24.86■■□□□ 1.57
TSPAN4-219ENST00000530404 KBTBD3Q8NAB2 608 aa24.86■■□□□ 1.57
TSPAN4-219ENST00000530404 ARRDC4Q8NCT1 418 aa24.86■■□□□ 1.57
TSPAN4-219ENST00000530404 VWA5AO00534 786 aa24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 FAM47AQ5JRC9 791 aa24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 SLC39A5Q6ZMH5 540 aa24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 RIOX2Q8IUF8 465 aa24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 SLC17A8Q8NDX2 589 aa24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 REPS2Q8NFH8 660 aa24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 LBHD1Q9BQE6 289 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 EPB41L4AQ9HCS5 686 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-219ENST00000530404 UNC80Q8N2C7 3258 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 M0R2C6 588 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 STAT3P40763 770 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 SBK1Q52WX2 424 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 APPBP2Q92624 585 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 FERMT2Q96AC1 680 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 DCTPP1Q9H773 170 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 MKNK2Q9HBH9 465 aa24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 ZNF214Q9UL59 606 aaPredicted RBP24.84■■□□□ 1.57
TSPAN4-219ENST00000530404 EYSQ5T1H1 3165 aa24.83■■□□□ 1.57
TSPAN4-219ENST00000530404 GPAA1O43292 621 aa24.83■■□□□ 1.57
TSPAN4-219ENST00000530404 LRRC41Q15345 812 aa24.83■■□□□ 1.57
TSPAN4-219ENST00000530404 GPR153Q6NV75 609 aa24.83■■□□□ 1.57
TSPAN4-219ENST00000530404 GPATCH3Q96I76 525 aa24.83■■□□□ 1.57
TSPAN4-219ENST00000530404 ROBO3Q96MS0 1386 aa24.82■■□□□ 1.56
TSPAN4-219ENST00000530404 RNF113AO15541 343 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-219ENST00000530404 TAL1P17542 331 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-219ENST00000530404 ADCYAP1R1P41586 468 aa24.82■■□□□ 1.56
TSPAN4-219ENST00000530404 TRIM60Q495X7 471 aa24.82■■□□□ 1.56
TSPAN4-219ENST00000530404 PRDM5Q9NQX1 630 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-219ENST00000530404 PRKAG2Q9UGJ0 569 aa24.82■■□□□ 1.56
TSPAN4-219ENST00000530404 PRDM1O75626 825 aa24.81■■□□□ 1.56
TSPAN4-219ENST00000530404 SLC4A3P48751 1232 aa24.81■■□□□ 1.56
TSPAN4-219ENST00000530404 TDO2P48775 406 aa24.81■■□□□ 1.56
TSPAN4-219ENST00000530404 KCTD2Q14681 263 aa24.81■■□□□ 1.56
TSPAN4-219ENST00000530404 ZNF792Q3KQV3 632 aa24.81■■□□□ 1.56
TSPAN4-219ENST00000530404 LENG1Q96BZ8 264 aaPredicted RBP24.81■■□□□ 1.56
TSPAN4-219ENST00000530404 F5H6K3 240 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 NDUFB10O96000 172 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 KLRC3Q07444 240 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 GIMAP6Q6P9H5 292 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 SEC62Q99442 399 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 SLF1Q9BQI6 1058 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 TINF2Q9BSI4 451 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 MTMR10Q9NXD2 777 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 NYAP2Q9P242 653 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 CLIP2Q9UDT6 1046 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 RIPK3Q9Y572 518 aa24.8■■□□□ 1.56
TSPAN4-219ENST00000530404 APPP05067 770 aa24.79■■□□□ 1.56
TSPAN4-219ENST00000530404 SNRNP48Q6IEG0 339 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-219ENST00000530404 XPNPEP3Q9NQH7 507 aa24.79■■□□□ 1.56
TSPAN4-219ENST00000530404 PGK1P00558 417 aa24.78■■□□□ 1.56
TSPAN4-219ENST00000530404 SH3RF1Q7Z6J0 888 aa24.78■■□□□ 1.56
TSPAN4-219ENST00000530404 OTUD7AQ8TE49 926 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-219ENST00000530404 IGKV6D-41A0A0C4DH26 115 aa24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 ZFYP08048 801 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 ZNF865P0CJ78 1059 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 RARBP10826 455 aa24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 SNX17Q15036 470 aa24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 ZNF444Q8N0Y2 327 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 CPXCR1Q8N123 301 aa24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 PDLIM7Q9NR12 457 aa24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 DIS3Q9Y2L1 958 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-219ENST00000530404 IFNL3Q8IZI9 196 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms