RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 PCDH11YQ9BZA8 1340 aa9.49□□□□□ -0.89
SVIP-204ENST00000530199 ITGB4P16144 1822 aa9.49□□□□□ -0.89
SVIP-204ENST00000530199 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 GREM1O60565 184 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 B3GALT4O96024 378 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 TFE3P19532 575 aaPredicted RBP9.48□□□□□ -0.89
SVIP-204ENST00000530199 ZNF157P51786 506 aaPredicted RBP9.48□□□□□ -0.89
SVIP-204ENST00000530199 PPP2R3AQ06190 1150 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 DDR1Q08345 913 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 RBL2Q08999 1139 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 ZNF423Q2M1K9 1284 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 CNTROBQ8N137 903 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
SVIP-204ENST00000530199 TTLL6Q8N841 843 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 NT5C1AQ9BXI3 368 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 TRIM33Q9UPN9 1127 aa9.48□□□□□ -0.89
SVIP-204ENST00000530199 CENPJQ9HC77 1338 aaPredicted RBP9.48□□□□□ -0.89
SVIP-204ENST00000530199 ELOA3CA0A087WX78 387 aaPredicted RBP9.47□□□□□ -0.89
SVIP-204ENST00000530199 ELOA3DA6NLF2 546 aaPredicted RBP9.47□□□□□ -0.89
SVIP-204ENST00000530199 RFC4P35249 363 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 ELOA3BQ3SY89 546 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 SNAP47Q5SQN1 464 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 CYP4F22Q6NT55 531 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 GOLM1Q8NBJ4 401 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 ELOA3Q8NG57 546 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 TTC9Q92623 222 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 LACRTQ9GZZ8 138 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 LTBP3Q9NS15 1303 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 DLEC1Q9Y238 1755 aa9.47□□□□□ -0.89
SVIP-204ENST00000530199 RPS6KA4O75676 772 aa9.46□□□□□ -0.9
SVIP-204ENST00000530199 PSAPL1Q6NUJ1 521 aa9.46□□□□□ -0.9
SVIP-204ENST00000530199 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.9
SVIP-204ENST00000530199 DDX21Q9NR30 783 aaKnown RBP eCLIP9.46□□□□□ -0.9
SVIP-204ENST00000530199 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.9
SVIP-204ENST00000530199 GGA1Q9UJY5 639 aa9.46□□□□□ -0.9
SVIP-204ENST00000530199 SAMM50Q9Y512 469 aa9.46□□□□□ -0.9
SVIP-204ENST00000530199 KTN1Q86UP2 1357 aaKnown RBP9.46□□□□□ -0.9
SVIP-204ENST00000530199 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 POLRMTO00411 1230 aaKnown RBP9.45□□□□□ -0.9
SVIP-204ENST00000530199 ESRRAP11474 423 aaPredicted RBP9.45□□□□□ -0.9
SVIP-204ENST00000530199 BMP6P22004 513 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 PNMA8AQ86V59 439 aaPredicted RBP9.45□□□□□ -0.9
SVIP-204ENST00000530199 TRIM42Q8IWZ5 723 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 SLC17A8Q8NDX2 589 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 LTV1Q96GA3 475 aaPredicted RBP9.45□□□□□ -0.9
SVIP-204ENST00000530199 LNPKQ9C0E8 428 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 UBP1Q9NZI7 540 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 EFR3BQ9Y2G0 817 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 CNTNAP4Q9C0A0 1308 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 INSRP06213 1382 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 KDRP35968 1356 aa9.45□□□□□ -0.9
SVIP-204ENST00000530199 MKI67P46013 3256 aaKnown RBP9.45□□□□□ -0.9
SVIP-204ENST00000530199 H3BM21 787 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 CYP27B1O15528 508 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 AOC2O75106 756 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
SVIP-204ENST00000530199 NME2P22392 152 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 TM4SF1P30408 202 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 NASPP49321 788 aaPredicted RBP9.44□□□□□ -0.9
SVIP-204ENST00000530199 RASIP1Q5U651 963 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 RAPGEF4Q8WZA2 1011 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 PCDHB5Q9Y5E4 795 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 FER1L6Q2WGJ9 1857 aa9.44□□□□□ -0.9
SVIP-204ENST00000530199 RGPD2P0DJD1 1756 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 EVC2Q86UK5 1308 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 USP42Q9H9J4 1324 aaKnown RBP9.43□□□□□ -0.9
SVIP-204ENST00000530199 FAM177BA6PVY3 158 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 RGS9O75916 674 aaPredicted RBP9.43□□□□□ -0.9
SVIP-204ENST00000530199 ALAS2P22557 587 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 CDC27P30260 824 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 CRKP46108 304 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 SOX9P48436 509 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 APOBRQ0VD83 1088 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 COL9A2Q14055 689 aaPredicted RBP9.43□□□□□ -0.9
SVIP-204ENST00000530199 MAP1SQ66K74 1059 aaPredicted RBP9.43□□□□□ -0.9
SVIP-204ENST00000530199 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
SVIP-204ENST00000530199 CCDC84Q86UT8 332 aaPredicted RBP9.43□□□□□ -0.9
SVIP-204ENST00000530199 NME9Q86XW9 330 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 CACTIN-AS1Q8N1I8 211 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 HHIPL1Q96JK4 782 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 CYP8B1Q9UNU6 501 aa9.43□□□□□ -0.9
SVIP-204ENST00000530199 SBNO2Q9Y2G9 1366 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 VSIG8P0DPA2 414 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 EPHA1P21709 976 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 HOXC9P31274 260 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 EPHX2P34913 555 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 GRM1Q13255 1194 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 IKBKEQ14164 716 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 RNFT1Q5M7Z0 435 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 SOGA3Q5TF21 947 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 NBPF6Q5VWK0 638 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 SLCO4C1Q6ZQN7 724 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 SULF2Q8IWU5 870 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 GOLGA6L1Q8N7Z2 621 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 STK35Q8TDR2 534 aa9.42□□□□□ -0.9
SVIP-204ENST00000530199 NBPF4Q96M43 638 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms