RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 HARSP12081 509 aaKnown RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 CCDC122Q5T0U0 273 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 DAAM2Q86T65 1068 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 GOLGA5Q8TBA6 731 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 PRPF31Q8WWY3 499 aaKnown RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 HAUS7Q99871 368 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 BAG1Q99933 345 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 PAGR1Q9BTK6 254 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 GOLGA6CA6NDK9 693 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 GOLGA6BA6NDN3 693 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 PRPF6O94906 941 aaKnown RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 GOLGA6DP0CG33 693 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 GALNT17Q6IS24 598 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 TICAM2Q86XR7 235 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 SNX29Q8TEQ0 813 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 TBC1D31Q96DN5 1066 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 NACA2Q9H009 215 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 MIS12Q9H081 205 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 SPON1Q9HCB6 807 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 GOLGA6AQ9NYA3 693 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 VIMP08670 466 aaKnown RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 PCP11498 1178 aaKnown RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 LGSNQ5TDP6 509 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 OTUD7BQ6GQQ9 843 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 NSMFQ6X4W1 530 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 SWAP70Q9UH65 585 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 LAMC1P11047 1609 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-225ENST00000530094 SPATA31A5Q5VU36 1347 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 SPATA31A7Q8IWB4 1347 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 SYNRGQ9UMZ2 1314 aa9.39□□□□□ -0.91
CTNND1-225ENST00000530094 NCAPD2Q15021 1401 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 HMGB1P1B2RPK0 211 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 PDE6AP16499 860 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 ADRA2BP18089 450 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 ITIH3Q06033 890 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 FYB2Q5VWT5 728 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 ZNF365Q70YC5 407 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 RTKN2Q8IZC4 609 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 ATRIPQ8WXE1 791 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 SSH2Q76I76 1423 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 TXKP42681 527 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 USH1GQ495M9 461 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 SLC9C1Q4G0N8 1177 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 GADL1Q6ZQY3 521 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 MYL10Q9BUA6 226 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 GIPC1O14908 333 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 ZNF853P0CG23 659 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 COPRSQ9NQ92 184 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 STIM2Q9P246 746 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 UTP11Q9Y3A2 253 aaKnown RBP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 N4BP1O75113 896 aaKnown RBP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 HSP90AA4PQ58FG1 418 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 CIAPIN1Q6FI81 312 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 SYNE4Q8N205 404 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 RIOK1Q9BRS2 568 aaKnown RBP9.38□□□□□ -0.91
CTNND1-225ENST00000530094 SETBP1Q9Y6X0 1596 aa9.38□□□□□ -0.91
CTNND1-225ENST00000530094 CIB2O75838 187 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 NBPF11Q86T75 865 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 ZBTB8OSQ8IWT0 167 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 SLFN12Q8IYM2 578 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 MYCT1Q8N699 235 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 PLIN2Q99541 437 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 KRT9P35527 623 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 DEFB132Q7Z7B7 95 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 PPARAQ07869 468 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 RASA3Q14644 834 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 DIS3L2Q8IYB7 885 aaKnown RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 SLC17A8Q8NDX2 589 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 FLOT1O75955 427 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 HDXQ7Z353 690 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 CCDC84Q86UT8 332 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 REXO1Q8N1G1 1221 aaKnown RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 IGSF22Q8N9C0 903 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 GSDMBQ8TAX9 411 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 CAPZA3Q96KX2 299 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 SEC62Q99442 399 aaKnown RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 CACYBPQ9HB71 228 aaKnown RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 KCNK9Q9NPC2 374 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 IMPACTQ9P2X3 320 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 CPLX4Q7Z7G2 160 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 CABP7Q86V35 215 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 VPS52Q8N1B4 723 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 IPO4Q8TEX9 1081 aaKnown RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 IFT81Q8WYA0 676 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 PPP1R9BQ96SB3 815 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 NAPGQ99747 312 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-225ENST00000530094 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms