RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SLC10A4Q96EP9 437 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 KAT14Q9H8E8 782 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 AS3MTQ9HBK9 375 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 CLIP2Q9UDT6 1046 aa16.72■□□□□ 0.27
TTC39A-216ENST00000530004 DOCK1Q14185 1865 aa16.71■□□□□ 0.27
TTC39A-216ENST00000530004 IFNAR1P17181 557 aa16.71■□□□□ 0.27
TTC39A-216ENST00000530004 ATP2B2Q01814 1243 aa16.71■□□□□ 0.27
TTC39A-216ENST00000530004 PPATQ06203 517 aa16.71■□□□□ 0.27
TTC39A-216ENST00000530004 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
TTC39A-216ENST00000530004 SLC26A6Q9BXS9 759 aa16.71■□□□□ 0.27
TTC39A-216ENST00000530004 STK36Q9NRP7 1315 aa16.71■□□□□ 0.26
TTC39A-216ENST00000530004 A0A1W2PRG0 241 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 FMNL1O95466 1100 aaPredicted RBP16.7■□□□□ 0.26
TTC39A-216ENST00000530004 ECE1P42892 770 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
TTC39A-216ENST00000530004 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 MKL1Q969V6 931 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 OTUD5Q96G74 571 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 TMEM47Q9BQJ4 181 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 ARHGEF10LQ9HCE6 1279 aa16.7■□□□□ 0.26
TTC39A-216ENST00000530004 RBM28Q9NW13 759 aaKnown RBP16.7■□□□□ 0.26
TTC39A-216ENST00000530004 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
TTC39A-216ENST00000530004 TRAK2O60296 914 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
TTC39A-216ENST00000530004 SPP2Q13103 211 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 RESTQ13127 1097 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 CMTR1Q8N1G2 835 aaKnown RBP16.69■□□□□ 0.26
TTC39A-216ENST00000530004 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 PNMA1Q8ND90 353 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 ALG1Q9BT22 464 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 TMX2Q9Y320 296 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 AFG3L2Q9Y4W6 797 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 IRF6O14896 467 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 PRPF40AO75400 957 aaKnown RBP16.69■□□□□ 0.26
TTC39A-216ENST00000530004 RGMBQ6NW40 437 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 TRIM22Q8IYM9 498 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 LRRC47Q8N1G4 583 aaKnown RBP16.69■□□□□ 0.26
TTC39A-216ENST00000530004 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
TTC39A-216ENST00000530004 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 LMBRD1Q9NUN5 540 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 ATAD5Q96QE3 1844 aa16.69■□□□□ 0.26
TTC39A-216ENST00000530004 TRIM75PA6NK02 468 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 GJA5P36382 358 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 DNM1Q05193 864 aaKnown RBP16.68■□□□□ 0.26
TTC39A-216ENST00000530004 PPIL2Q13356 520 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 FBXO18Q8NFZ0 1043 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 KIAA1683Q9H0B3 1180 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 ZSCAN16Q9H4T2 348 aaPredicted RBP16.68■□□□□ 0.26
TTC39A-216ENST00000530004 SH2D4AQ9H788 454 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 SYNPO2Q9UMS6 1093 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 CNPY2Q9Y2B0 182 aa16.68■□□□□ 0.26
TTC39A-216ENST00000530004 PLEKHA8P1O95397 391 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 NCLP19338 710 aaKnown RBP16.67■□□□□ 0.26
TTC39A-216ENST00000530004 ZNF157P51786 506 aaPredicted RBP16.67■□□□□ 0.26
TTC39A-216ENST00000530004 BACE1P56817 501 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 MTMR2Q13614 643 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 AIFM3Q96NN9 605 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 FEZ1Q99689 392 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 GDPD2Q9HCC8 539 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 GJB4Q9NTQ9 266 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 KCNH4Q9UQ05 1017 aa16.67■□□□□ 0.26
TTC39A-216ENST00000530004 SPRYD7Q5W111 196 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 RASAL3Q86YV0 1011 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 WASF1Q92558 559 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 MAP3K14Q99558 947 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 C19orf81C9J6K1 198 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 CXCL11O14625 94 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 DEXIO95424 95 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
TTC39A-216ENST00000530004 KIF5BP33176 963 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 USP14P54578 494 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 FUT2Q10981 343 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 ZYXQ15942 572 aaKnown RBP16.66■□□□□ 0.26
TTC39A-216ENST00000530004 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
TTC39A-216ENST00000530004 RGS22Q8NE09 1264 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 RNF26Q9BY78 433 aaPredicted RBP16.66■□□□□ 0.26
TTC39A-216ENST00000530004 VCPKMTQ9H867 229 aa16.66■□□□□ 0.26
TTC39A-216ENST00000530004 F5H6K3 240 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 FIBPO43427 364 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
TTC39A-216ENST00000530004 KLRC3Q07444 240 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 TRIM29Q14134 588 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 SH3D19Q5HYK7 790 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
TTC39A-216ENST00000530004 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 SLC10A3P09131 477 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 HMGCS2P54868 508 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms