RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 USP17L20D6RJB6 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 PDHXO00330 501 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 PDHBP11177 359 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 TM4SF4P48230 202 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 IRX3P78415 501 aaPredicted RBP16.25■□□□□ 0.19
BEST1-206ENST00000529265 USP17L24Q0WX57 530 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 GPAT2Q6NUI2 795 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 NOL8Q76FK4 1167 aaKnown RBP16.25■□□□□ 0.19
BEST1-206ENST00000529265 ANKRD23Q86SG2 305 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 SGMS1Q86VZ5 419 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 IFNL1Q8IU54 200 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 FAM43AQ8N2R8 423 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 GMCL1Q96IK5 515 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 PTPN18Q99952 460 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 MYL10Q9BUA6 226 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 PNMA3Q9UL41 463 aa16.25■□□□□ 0.19
BEST1-206ENST00000529265 FRMPD2Q68DX3 1309 aaPredicted RBP16.25■□□□□ 0.19
BEST1-206ENST00000529265 IGF2BP3O00425 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
BEST1-206ENST00000529265 ZBTB43O43298 467 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 ST18O60284 1047 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 DDAH1O94760 285 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 PARP1P09874 1014 aaKnown RBP16.24■□□□□ 0.19
BEST1-206ENST00000529265 CALM1P0DP23 149 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 CALM2P0DP24 149 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 CALM3P0DP25 149 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 AK2P54819 239 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 TOB2Q14106 344 aaPredicted RBP16.24■□□□□ 0.19
BEST1-206ENST00000529265 CATSPERGQ6ZRH7 1159 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 KCTD1Q719H9 257 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 RASGRP2Q7LDG7 609 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 RAB11FIP4Q86YS3 637 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 FBXL16Q8N461 479 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
BEST1-206ENST00000529265 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
BEST1-206ENST00000529265 AGXT2Q9BYV1 514 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 GPCPD1Q9NPB8 672 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
BEST1-206ENST00000529265 TMEM232C9JQI7 657 aa16.23■□□□□ 0.19
BEST1-206ENST00000529265 FLOT1O75955 427 aa16.23■□□□□ 0.19
BEST1-206ENST00000529265 GOLGA8HP0CJ92 632 aa16.23■□□□□ 0.19
BEST1-206ENST00000529265 RXRAP19793 462 aa16.23■□□□□ 0.19
BEST1-206ENST00000529265 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
BEST1-206ENST00000529265 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
BEST1-206ENST00000529265 CCDC144CPQ8IYA2 1237 aa16.23■□□□□ 0.19
BEST1-206ENST00000529265 ALDH8A1Q9H2A2 487 aaPredicted RBP16.23■□□□□ 0.19
BEST1-206ENST00000529265 SLC45A1Q9Y2W3 748 aa16.23■□□□□ 0.19
BEST1-206ENST00000529265 BAZ2BQ9UIF8 2168 aaKnown RBP16.23■□□□□ 0.19
BEST1-206ENST00000529265 GOLGA8BA8MQT2 603 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 ALDH1A1P00352 501 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 KIF5BP33176 963 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 ZNF543Q08ER8 600 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 TROAPQ12815 778 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 GRM4Q14833 912 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
BEST1-206ENST00000529265 ASPRV1Q53RT3 343 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 GPATCH4Q5T3I0 446 aaKnown RBP16.22■□□□□ 0.19
BEST1-206ENST00000529265 CHURC1Q8WUH1 139 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
BEST1-206ENST00000529265 ZCCHC17Q9NP64 241 aaKnown RBP16.22■□□□□ 0.19
BEST1-206ENST00000529265 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 MYH6P13533 1939 aa16.22■□□□□ 0.19
BEST1-206ENST00000529265 PARP14Q460N5 1801 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 GOLGA8AA7E2F4 631 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 SNHG28P0DPA3 235 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 METAP2P50579 478 aaKnown RBP eCLIP16.21■□□□□ 0.19
BEST1-206ENST00000529265 STAT2P52630 851 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 COG2Q14746 738 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 DNAJC5GQ8N7S2 189 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 SMCR8Q8TEV9 937 aaPredicted RBP16.21■□□□□ 0.19
BEST1-206ENST00000529265 KIFC2Q96AC6 838 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 PARK7Q99497 189 aaKnown RBP16.21■□□□□ 0.19
BEST1-206ENST00000529265 BEGAINQ9BUH8 593 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 HOXC10Q9NYD6 342 aa16.21■□□□□ 0.19
BEST1-206ENST00000529265 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
BEST1-206ENST00000529265 CYP2C8P10632 490 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 SLC16A2P36021 539 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
BEST1-206ENST00000529265 STK3Q13188 491 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 RTN1Q16799 776 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 TTBK2Q6IQ55 1244 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 FAM160B2Q86V87 743 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 MAP3K14Q99558 947 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 P2RX7Q99572 595 aaKnown RBP16.2■□□□□ 0.18
BEST1-206ENST00000529265 SLF1Q9BQI6 1058 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 ZFYVE28Q9HCC9 887 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 FBXO28Q9NVF7 368 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 MAD2L2Q9UI95 211 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 CTDP1Q9Y5B0 961 aaPredicted RBP16.2■□□□□ 0.18
BEST1-206ENST00000529265 THSD7BQ9C0I4 1608 aa16.2■□□□□ 0.18
BEST1-206ENST00000529265 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 GNAQP50148 359 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 STAG2Q8N3U4 1231 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 PRPF38AQ8NAV1 312 aaKnown RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 ZNF274Q96GC6 653 aaPredicted RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 UBA5Q9GZZ9 404 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms