RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
HIF3A-212ENST00000529205 CLASRPQ8N2M8 674 aaKnown RBP16.29■□□□□ 0.2
HIF3A-212ENST00000529205 EXOC6BQ9Y2D4 811 aa16.29■□□□□ 0.2
HIF3A-212ENST00000529205 A0A1W2PQ45 241 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-212ENST00000529205 A0A1W2PQY0 241 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 CCER2I3L3R5 266 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 STAT3P40763 770 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 TMEM132BQ14DG7 1078 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 TOX2Q96NM4 488 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 DNAJC2Q99543 621 aaKnown RBP16.28■□□□□ 0.2
HIF3A-212ENST00000529205 TSEN34Q9BSV6 310 aaKnown RBP16.28■□□□□ 0.2
HIF3A-212ENST00000529205 GOPCQ9HD26 462 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 STARD7Q9NQZ5 370 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
HIF3A-212ENST00000529205 MOXD2PA6NHM9 499 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 GOLIM4O00461 696 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 RAD21O60216 631 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 PGK2P07205 417 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 CEP85Q6P2H3 762 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 LCORLQ8N3X6 602 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 SLC44A5Q8NCS7 719 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
HIF3A-212ENST00000529205 DYNLL2Q96FJ2 89 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 KANSL2Q9H9L4 492 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.2
HIF3A-212ENST00000529205 MROH7Q68CQ1 1323 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 A0A0G2JMZ2 1700 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
HIF3A-212ENST00000529205 CYP2D6P10635 497 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 AKR1B1P15121 316 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 DNAJB2P25686 324 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 ITGB8P26012 769 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 TJAP1Q5JTD0 557 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 ANKRD33Q7Z3H0 272 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
HIF3A-212ENST00000529205 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.19
HIF3A-212ENST00000529205 ARMT1Q9H993 441 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 ADAMTS5Q9UNA0 930 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 NAV1Q8NEY1 1877 aa16.26■□□□□ 0.19
HIF3A-212ENST00000529205 VWA5AO00534 786 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
HIF3A-212ENST00000529205 CDK8P49336 464 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 ACLYP53396 1101 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 EVX2Q03828 476 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 SIAH1Q8IUQ4 282 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 TIFAQ96CG3 184 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 GLT1D1Q96MS3 346 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 GAS2L1Q99501 681 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-212ENST00000529205 ZNF576Q9H609 170 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-212ENST00000529205 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
HIF3A-212ENST00000529205 TCRBV5S4A2TA0A5A2 114 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 TIMP1P01033 207 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 ZNF865P0CJ78 1059 aaPredicted RBP16.24■□□□□ 0.19
HIF3A-212ENST00000529205 EPHB4P54760 987 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 FAAP100Q0VG06 881 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 PPIGQ13427 754 aaKnown RBP eCLIP16.24■□□□□ 0.19
HIF3A-212ENST00000529205 GRIN2CQ14957 1233 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 CCDC129Q6ZRS4 1044 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 CLEC10AQ8IUN9 316 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 PCSK9Q8NBP7 692 aaKnown RBP16.24■□□□□ 0.19
HIF3A-212ENST00000529205 VTI1AQ96AJ9 217 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 PPP1R9AQ9ULJ8 1098 aa16.24■□□□□ 0.19
HIF3A-212ENST00000529205 TNFRSF10AO00220 468 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 ADAMTS4O75173 837 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 MBD4O95243 580 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 TAL1P17542 331 aaPredicted RBP16.23■□□□□ 0.19
HIF3A-212ENST00000529205 KCNA10Q16322 511 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 C12orf60Q5U649 245 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 C16orf86Q6ZW13 317 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 TMEM199Q8N511 208 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 FBXO28Q9NVF7 368 aa16.23■□□□□ 0.19
HIF3A-212ENST00000529205 ELP1O95163 1332 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 SYNGAP1Q96PV0 1343 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 USP17L12C9JPN9 530 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 USP17L21D6R901 530 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 APBB1O00213 710 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 TLR3O15455 904 aaKnown RBP16.22■□□□□ 0.19
HIF3A-212ENST00000529205 PRKAB2O43741 272 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 ADD2P35612 726 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 MFSD5Q6N075 450 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 ZSCAN25Q6NSZ9 544 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 TEX13BQ9BXU2 312 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 PAG1Q9NWQ8 432 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-212ENST00000529205 ZNF214Q9UL59 606 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-212ENST00000529205 CUL9Q8IWT3 2517 aa16.22■□□□□ 0.19
HIF3A-212ENST00000529205 SYNRGQ9UMZ2 1314 aa16.21■□□□□ 0.19
HIF3A-212ENST00000529205 DUSP11O75319 330 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms