RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 DHX36Q9H2U1 1008 aaKnown RBP7.37□□□□□ -1.23
NUP98-215ENST00000529063 PIH1D3Q9NQM4 214 aaKnown RBP7.37□□□□□ -1.23
NUP98-215ENST00000529063 TLR7Q9NYK1 1049 aaKnown RBP7.37□□□□□ -1.23
NUP98-215ENST00000529063 LRP2BPQ9P2M1 347 aa7.37□□□□□ -1.23
NUP98-215ENST00000529063 SAP30BPQ9UHR5 308 aaKnown RBP7.37□□□□□ -1.23
NUP98-215ENST00000529063 LHX6Q9UPM6 363 aa7.37□□□□□ -1.23
NUP98-215ENST00000529063 HDAC5Q9UQL6 1122 aa7.37□□□□□ -1.23
NUP98-215ENST00000529063 STXBP5LQ9Y2K9 1186 aa7.37□□□□□ -1.23
NUP98-215ENST00000529063 C19orf81C9J6K1 198 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 C3orf80F5H4A9 247 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 KDM4AO75164 1064 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 UQCRFS1P1P0C7P4 283 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 HOXB3P14651 431 aaPredicted RBP7.36□□□□□ -1.23
NUP98-215ENST00000529063 PTPREP23469 700 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 MAPK4P31152 587 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 ZAP70P43403 619 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 PDE4CQ08493 712 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 TNNI3KQ59H18 835 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 GORABQ5T7V8 394 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 PLEKHH3Q7Z736 793 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 PACS2Q86VP3 889 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 TRPV1Q8NER1 839 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 GUCD1Q96NT3 240 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 UBE2OQ9C0C9 1292 aaKnown RBP7.36□□□□□ -1.23
NUP98-215ENST00000529063 GPR108Q9NPR9 543 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 TMOD4Q9NZQ9 345 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 NDUFB9Q9Y6M9 179 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 FPGT-TNNI3KV9GXZ4 949 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 MYH8P13535 1937 aa7.36□□□□□ -1.23
NUP98-215ENST00000529063 COL11A1P12107 1806 aaPredicted RBP7.36□□□□□ -1.23
NUP98-215ENST00000529063 TRIM6-TRIM34B2RNG4 842 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 BCAR3O75815 825 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 GH2P01242 217 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 GNAI2P04899 355 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 RGS2P41220 211 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 G3BP1Q13283 466 aaKnown RBP eCLIP7.35□□□□□ -1.232e-6■■■□□ 17.5
NUP98-215ENST00000529063 PDE3AQ14432 1141 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 ZYXQ15942 572 aaKnown RBP7.35□□□□□ -1.23
NUP98-215ENST00000529063 TTC39AQ5SRH9 613 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 TATDN1Q6P1N9 297 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 FOXP4Q8IVH2 680 aaPredicted RBP7.35□□□□□ -1.23
NUP98-215ENST00000529063 TRMT44Q8IYL2 757 aaKnown RBP7.35□□□□□ -1.23
NUP98-215ENST00000529063 CRACR2BQ8N4Y2 399 aaPredicted RBP7.35□□□□□ -1.23
NUP98-215ENST00000529063 NPLOC4Q8TAT6 608 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 ACER1Q8TDN7 264 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 SSH3Q8TE77 659 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 ZNF512BQ96KM6 892 aaPredicted RBP7.35□□□□□ -1.23
NUP98-215ENST00000529063 GINM1Q9NU53 330 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 BTBD7Q9P203 1132 aa7.35□□□□□ -1.23
NUP98-215ENST00000529063 DBNLQ9UJU6 430 aaKnown RBP7.35□□□□□ -1.23
NUP98-215ENST00000529063 PLXNA1Q9UIW2 1896 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 POTEB2H3BUK9 544 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 BAG3O95817 575 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 HOXC6P09630 235 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 VCAM1P19320 739 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 GUCY1A2P33402 732 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 SHMT1P34896 483 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 USP46P62068 366 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 GRB14Q14449 540 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 USP17L2Q6R6M4 530 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 ATF7IPQ6VMQ6 1270 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 LBX2Q6XYB7 198 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 CATSPERGQ6ZRH7 1159 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 TMEM57Q8N5G2 664 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 MIGA1Q8NAN2 632 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 GTF3C2Q8WUA4 911 aaPredicted RBP7.34□□□□□ -1.23
NUP98-215ENST00000529063 NOL10Q9BSC4 688 aaKnown RBP7.34□□□□□ -1.23
NUP98-215ENST00000529063 COL25A1Q9BXS0 654 aaPredicted RBP7.34□□□□□ -1.23
NUP98-215ENST00000529063 EHD4Q9H223 541 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 ANTXR1Q9H6X2 564 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 RABGAP1Q9Y3P9 1069 aa7.34□□□□□ -1.23
NUP98-215ENST00000529063 ZNFX1Q9P2E3 1918 aaKnown RBP7.34□□□□□ -1.23
NUP98-215ENST00000529063 BAZ2AQ9UIF9 1905 aaKnown RBP7.34□□□□□ -1.23
NUP98-215ENST00000529063 SLC15A5A6NIM6 579 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L15C9J2P7 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L13C9JLJ4 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L11C9JVI0 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L18D6R9N7 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L22D6RA61 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L17D6RBQ6 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L19D6RCP7 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L20D6RJB6 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 HLA-DOAP06340 250 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 FDX1P10109 184 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 CYBAP13498 195 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 CYP7A1P22680 504 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 CYP2C19P33261 490 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 PLCD1P51178 756 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 USP17L24Q0WX57 530 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 EAF2Q96CJ1 260 aaPredicted RBP7.33□□□□□ -1.24
NUP98-215ENST00000529063 EDC3Q96F86 508 aaKnown RBP7.33□□□□□ -1.24
NUP98-215ENST00000529063 RIOK1Q9BRS2 568 aaKnown RBP7.33□□□□□ -1.24
NUP98-215ENST00000529063 SENP6Q9GZR1 1112 aaPredicted RBP7.33□□□□□ -1.24
NUP98-215ENST00000529063 KIAA1683Q9H0B3 1180 aa7.33□□□□□ -1.24
NUP98-215ENST00000529063 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
NUP98-215ENST00000529063 GREB1LQ9C091 1923 aaPredicted RBP7.33□□□□□ -1.24
NUP98-215ENST00000529063 MUC3AQ02505 3323 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 A0A1W2PRG0 241 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 SMAPO00193 183 aa7.32□□□□□ -1.24
NUP98-215ENST00000529063 DNM1LO00429 736 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms