RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 UBA5Q9GZZ9 404 aa28.76■■■□□ 2.2
LDLRAD3-203ENST00000528989 RBM28Q9NW13 759 aaKnown RBP28.76■■■□□ 2.2
LDLRAD3-203ENST00000528989 SMC3Q9UQE7 1217 aa28.76■■■□□ 2.2
LDLRAD3-203ENST00000528989 PASKQ96RG2 1323 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 hCG_1642624A0A1W2PR95 340 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 KLRF2D3W0D1 207 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 FDPSP14324 419 aaKnown RBP28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 PPP2R5BQ15173 497 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 CCDC96Q2M329 555 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 SMC1BQ8NDV3 1235 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 SMARCC2Q8TAQ2 1214 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 LLPHQ9BRT6 129 aaKnown RBP28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 KIAA1683Q9H0B3 1180 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 AS3MTQ9HBK9 375 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 GOPCQ9HD26 462 aa28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 ISY1Q9ULR0 285 aaKnown RBP28.76■■■□□ 2.19
LDLRAD3-203ENST00000528989 TOMM70O94826 608 aa28.75■■■□□ 2.19
LDLRAD3-203ENST00000528989 BACE1P56817 501 aa28.75■■■□□ 2.19
LDLRAD3-203ENST00000528989 SH2D4AQ9H788 454 aa28.75■■■□□ 2.19
LDLRAD3-203ENST00000528989 EMILIN3Q9NT22 766 aa28.75■■■□□ 2.19
LDLRAD3-203ENST00000528989 SYNPO2Q9UMS6 1093 aa28.75■■■□□ 2.19
LDLRAD3-203ENST00000528989 IRF6O14896 467 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 CYTH3O43739 400 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 IFNAR1P17181 557 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 SLC16A2P36021 539 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 PIBF1Q8WXW3 757 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 FKBP1BP68106 108 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 ERO1BQ86YB8 467 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 SLC10A4Q96EP9 437 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 GMCL1Q96IK5 515 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 SLC26A6Q9BXS9 759 aa28.74■■■□□ 2.19
LDLRAD3-203ENST00000528989 HMGCS2P54868 508 aa28.73■■■□□ 2.19
LDLRAD3-203ENST00000528989 FAM83BQ5T0W9 1011 aa28.73■■■□□ 2.19
LDLRAD3-203ENST00000528989 DCAF4Q8WV16 495 aa28.73■■■□□ 2.19
LDLRAD3-203ENST00000528989 OPTNQ96CV9 577 aa28.73■■■□□ 2.19
LDLRAD3-203ENST00000528989 SPDYE5A6NIY4 337 aa28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 ASPRV1Q53RT3 343 aa28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 CPLX2Q6PUV4 134 aaKnown RBP28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 V9GY48 417 aaPredicted RBP28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 BAZ2BQ9UIF8 2168 aaKnown RBP28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 BMP3P12645 472 aa28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 GJA5P36382 358 aa28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 PPATQ06203 517 aa28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 VAT1LQ9HCJ6 419 aa28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 ORC3Q9UBD5 711 aaPredicted RBP28.72■■■□□ 2.19
LDLRAD3-203ENST00000528989 AIFM3Q96NN9 605 aa28.71■■■□□ 2.19
LDLRAD3-203ENST00000528989 PHIPQ8WWQ0 1821 aa28.7■■■□□ 2.19
LDLRAD3-203ENST00000528989 TMEM232C9JQI7 657 aa28.7■■■□□ 2.19
LDLRAD3-203ENST00000528989 CDKL5O76039 1030 aa28.7■■■□□ 2.19
LDLRAD3-203ENST00000528989 SSRP1Q08945 709 aaKnown RBP28.7■■■□□ 2.19
LDLRAD3-203ENST00000528989 GPATCH4Q5T3I0 446 aaKnown RBP28.7■■■□□ 2.19
LDLRAD3-203ENST00000528989 RBM46Q8TBY0 533 aaKnown RBP28.7■■■□□ 2.19
LDLRAD3-203ENST00000528989 CNTNAP5Q8WYK1 1306 aa28.7■■■□□ 2.18
LDLRAD3-203ENST00000528989 DDIT3P35638 169 aa28.7■■■□□ 2.18
LDLRAD3-203ENST00000528989 GNAQP50148 359 aa28.7■■■□□ 2.18
LDLRAD3-203ENST00000528989 FMNL1O95466 1100 aaPredicted RBP28.69■■■□□ 2.18
LDLRAD3-203ENST00000528989 HUNKP57058 714 aa28.69■■■□□ 2.18
LDLRAD3-203ENST00000528989 VCAM1P19320 739 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 FOSBP53539 338 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 USP14P54578 494 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 MKRN3Q13064 507 aaKnown RBP28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 PKP1Q13835 747 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 CWC22Q9HCG8 908 aaKnown RBP28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 GJB4Q9NTQ9 266 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 C19orf81C9J6K1 198 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 HMGN5P82970 282 aaKnown RBP28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 LPAR1Q92633 364 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 FBXO28Q9NVF7 368 aa28.68■■■□□ 2.18
LDLRAD3-203ENST00000528989 UNCXA6NJT0 531 aa28.67■■■□□ 2.18
LDLRAD3-203ENST00000528989 SAPCD2Q86UD0 394 aa28.67■■■□□ 2.18
LDLRAD3-203ENST00000528989 ADGRF4Q8IZF3 695 aa28.67■■■□□ 2.18
LDLRAD3-203ENST00000528989 IKQ13123 557 aaPredicted RBP28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 PPIL2Q13356 520 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 PKN1Q16512 942 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 TRIM22Q8IYM9 498 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 FAM184AQ8NB25 1140 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 LZTS2Q9BRK4 669 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 SPZ1Q9BXG8 430 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 RIOX1Q9H6W3 641 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 PRPF3O43395 683 aaKnown RBP28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 SAMD1Q6SPF0 538 aaPredicted RBP28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 HOMER1Q86YM7 354 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 RNF26Q9BY78 433 aaPredicted RBP28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 JMJD4Q9H9V9 463 aa28.66■■■□□ 2.18
LDLRAD3-203ENST00000528989 SNAP25P60880 206 aa28.65■■■□□ 2.18
LDLRAD3-203ENST00000528989 SH3D19Q5HYK7 790 aa28.65■■■□□ 2.18
LDLRAD3-203ENST00000528989 PIGSQ96S52 555 aa28.65■■■□□ 2.18
LDLRAD3-203ENST00000528989 RPAP3Q9H6T3 665 aaPredicted RBP28.65■■■□□ 2.18
LDLRAD3-203ENST00000528989 KCNH4Q9UQ05 1017 aa28.65■■■□□ 2.18
LDLRAD3-203ENST00000528989 WDR46O15213 610 aaKnown RBP28.64■■■□□ 2.18
LDLRAD3-203ENST00000528989 SYT1P21579 422 aa28.64■■■□□ 2.18
LDLRAD3-203ENST00000528989 LARP1BQ659C4 914 aaKnown RBP28.64■■■□□ 2.18
LDLRAD3-203ENST00000528989 C12orf42Q96LP6 360 aa28.64■■■□□ 2.18
LDLRAD3-203ENST00000528989 TRPM7Q96QT4 1865 aa28.64■■■□□ 2.17
LDLRAD3-203ENST00000528989 STAT2P52630 851 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 OTUD7BQ6GQQ9 843 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 TANGO6Q9C0B7 1094 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 TMOD4Q9NZQ9 345 aa28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 A0A0G2JLL6 359 aaPredicted RBP28.63■■■□□ 2.17
LDLRAD3-203ENST00000528989 CXCL11O14625 94 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms