RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 TCP10Q12799 353 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 CRHR2Q13324 411 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 SNAPC2Q13487 334 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 CCL15Q16663 113 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 TTC39AQ5SRH9 613 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 CERS3Q8IU89 383 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 ZFPM1Q8IX07 1006 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 SIRT2Q8IXJ6 389 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 ZKSCAN4Q969J2 545 aaPredicted RBP8.63□□□□□ -1.03
ITGB1-218ENST00000528877 R3HDMLQ9H3Y0 253 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 EXOC6BQ9Y2D4 811 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 NDUFB9Q9Y6M9 179 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 CDK5RAP2Q96SN8 1893 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 PHIPQ8WWQ0 1821 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 DDTLA6NHG4 134 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-218ENST00000528877 WFS1O76024 890 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 TIMP2P16035 220 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 INPP5BP32019 993 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 RGS19P49795 217 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 TBC1D9Q6ZT07 1266 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 SCYL3Q8IZE3 742 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-218ENST00000528877 ADAM32Q8TC27 787 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.62□□□□□ -1.03
ITGB1-218ENST00000528877 KIF1BPQ96EK5 621 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 OSBPL5Q9H0X9 879 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-218ENST00000528877 RAI14Q9P0K7 980 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 LRP2BPQ9P2M1 347 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 GMPR2Q9P2T1 348 aaKnown RBP8.62□□□□□ -1.03
ITGB1-218ENST00000528877 COG6Q9Y2V7 657 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 LOC285556D6RIA3 1793 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 PTPRFP10586 1907 aa8.62□□□□□ -1.03
ITGB1-218ENST00000528877 RBBP6Q7Z6E9 1792 aaKnown RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 ADGRA2Q96PE1 1338 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 ZBBXA8MT70 800 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 RAB11FIP3O75154 756 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 ZAP70P43403 619 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 MOGSQ13724 837 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 NAA16Q6N069 864 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 FBXO46Q6PJ61 603 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 MIGA2Q7L4E1 593 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 ANKRD23Q86SG2 305 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 ADGRA1Q86SQ6 560 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 METTL16Q86W50 562 aaKnown RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 FAM43AQ8N2R8 423 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 RHPN1Q8TCX5 695 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 TRIM47Q96LD4 638 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 KLF16Q9BXK1 252 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 PIH1D3Q9NQM4 214 aaKnown RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
ITGB1-218ENST00000528877 HERC5Q9UII4 1024 aaKnown RBP8.61□□□□□ -1.03
ITGB1-218ENST00000528877 FLT1P17948 1338 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 MYO5AQ9Y4I1 1855 aaKnown RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 A0A0G2JLL6 359 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 BTBD19C9JJ37 291 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 CXCL11O14625 94 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 CTNND1O60716 968 aaKnown RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 BAG3O95817 575 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 PTPRAP18433 802 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 PICALMQ13492 652 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 C20orf194Q5TEA3 1177 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 PRRT2Q7Z6L0 340 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 AACSQ86V21 672 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 TEX11Q8IYF3 940 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 ERO1AQ96HE7 468 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 KCTD15Q96SI1 283 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 NOL10Q9BSC4 688 aaKnown RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 DHX36Q9H2U1 1008 aaKnown RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 SNRKQ9NRH2 765 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 SLC45A1Q9Y2W3 748 aa8.6□□□□□ -1.03
ITGB1-218ENST00000528877 MKI67P46013 3256 aaKnown RBP8.6□□□□□ -1.03
ITGB1-218ENST00000528877 ATAD5Q96QE3 1844 aa8.59□□□□□ -1.03
ITGB1-218ENST00000528877 TLR2O60603 784 aa8.59□□□□□ -1.03
ITGB1-218ENST00000528877 UPP2O95045 317 aa8.59□□□□□ -1.03
ITGB1-218ENST00000528877 ZIC2O95409 532 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-218ENST00000528877 SP3Q02447 781 aa8.59□□□□□ -1.03
ITGB1-218ENST00000528877 TTF1Q15361 905 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-218ENST00000528877 TAF1CQ15572 869 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-218ENST00000528877 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
ITGB1-218ENST00000528877 CLASRPQ8N2M8 674 aaKnown RBP8.59□□□□□ -1.03
ITGB1-218ENST00000528877 SH3RF3Q8TEJ3 882 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-218ENST00000528877 CCDC8Q9H0W5 538 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-218ENST00000528877 ZFYVE28Q9HCC9 887 aa8.59□□□□□ -1.03
ITGB1-218ENST00000528877 AATFQ9NY61 560 aaKnown RBP eCLIP8.59□□□□□ -1.032e-7■□□□□ 10.9
ITGB1-218ENST00000528877 NAV1Q8NEY1 1877 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 CCDC85CA6NKD9 419 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 GNRH1P01148 92 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 NR3C2P08235 984 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 MAP3K12Q12852 859 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
ITGB1-218ENST00000528877 PARK7Q99497 189 aaKnown RBP8.58□□□□□ -1.04
ITGB1-218ENST00000528877 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 EHD4Q9H223 541 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 DNAJC18Q9H819 358 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 IL1RAPL2Q9NP60 686 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 PICK1Q9NRD5 415 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms