RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 TRDNQ13061 729 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 CREB3L3Q68CJ9 461 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 RCSD1Q6JBY9 416 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 CYB5R4Q7L1T6 521 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 IQCA1Q86XH1 822 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 RABGAP1Q9Y3P9 1069 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 RLFQ13129 1914 aa20.55■□□□□ 0.88
CHRDL2-206ENST00000528789 TNPO2O14787 897 aaKnown RBP20.55■□□□□ 0.88
CHRDL2-206ENST00000528789 PKN2Q16513 984 aaKnown RBP20.55■□□□□ 0.88
CHRDL2-206ENST00000528789 LBX2Q6XYB7 198 aa20.55■□□□□ 0.88
CHRDL2-206ENST00000528789 ZSCAN10Q96SZ4 725 aaPredicted RBP20.55■□□□□ 0.88
CHRDL2-206ENST00000528789 PTPN22Q9Y2R2 807 aa20.55■□□□□ 0.88
CHRDL2-206ENST00000528789 BMP3P12645 472 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 SLC1A4P43007 532 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 NT5C2P49902 561 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 NECTIN1Q15223 517 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 FBXO46Q6PJ61 603 aaPredicted RBP20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 NCOA7Q8NI08 942 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 UBAC1Q9BSL1 405 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 PPP1R9AQ9ULJ8 1098 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 MGAMO43451 1857 aa20.54■□□□□ 0.88
CHRDL2-206ENST00000528789 TNKSO95271 1327 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 MYPNQ86TC9 1320 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 PRKCZQ05513 592 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 KCTD1Q719H9 257 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 CHST3Q7LGC8 479 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 ENAHQ8N8S7 591 aaPredicted RBP20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 KIFC2Q96AC6 838 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 ABHD8Q96I13 439 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 GMCL1Q96IK5 515 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 TTC14Q96N46 770 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 PORCNQ9H237 461 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 PTCH2Q9Y6C5 1203 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 PARP14Q460N5 1801 aa20.53■□□□□ 0.88
CHRDL2-206ENST00000528789 TMEM232C9JQI7 657 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 GNRH1P01148 92 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 HOXD10P28358 340 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 PLS1Q14651 629 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 CCDC178Q5BJE1 867 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 DGKHQ86XP1 1220 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 CCAR1Q8IX12 1150 aaKnown RBP20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 SRRDQ9UH36 339 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 FEM1BQ9UK73 627 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 GABRQQ9UN88 632 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
CHRDL2-206ENST00000528789 A0A0G2JMZ2 1700 aa20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 WDR78Q5VTH9 848 aa20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 MB21D2Q8IYB1 491 aaPredicted RBP20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 MB21D1Q8N884 522 aa20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 DCAF4Q8WV16 495 aa20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 COA7Q96BR5 231 aa20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 FRMPD2Q68DX3 1309 aaPredicted RBP20.51■□□□□ 0.87
CHRDL2-206ENST00000528789 VWA5AO00534 786 aa20.5■□□□□ 0.87
CHRDL2-206ENST00000528789 CCNA1P78396 465 aa20.5■□□□□ 0.87
CHRDL2-206ENST00000528789 TMEM132BQ14DG7 1078 aa20.5■□□□□ 0.87
CHRDL2-206ENST00000528789 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
CHRDL2-206ENST00000528789 MOV10L1Q9BXT6 1211 aaKnown RBP20.5■□□□□ 0.87
CHRDL2-206ENST00000528789 SPATC1LQ9H0A9 340 aa20.5■□□□□ 0.87
CHRDL2-206ENST00000528789 ADAMTS5Q9UNA0 930 aa20.5■□□□□ 0.87
CHRDL2-206ENST00000528789 IFIT3O14879 490 aaKnown RBP20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 PDHBP11177 359 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 MAPK4P31152 587 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 STAT2P52630 851 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 ANTXR2P58335 489 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 COL9A3Q14050 684 aaPredicted RBP20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 IFIT1BQ5T764 474 aaKnown RBP20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 TTBK2Q6IQ55 1244 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 RASEFQ8IZ41 740 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 PRPF38AQ8NAV1 312 aaKnown RBP20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 PNMA1Q8ND90 353 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 RAET1EQ8TD07 263 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 ANKS1AQ92625 1134 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 GPCPD1Q9NPB8 672 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 DOCK3Q8IZD9 2030 aa20.49■□□□□ 0.87
CHRDL2-206ENST00000528789 REC8O95072 547 aa20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 FLT3LGP49771 235 aa20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 PRMT2P55345 433 aa20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 SEC23AQ15436 765 aa20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 GPR142Q7Z601 462 aa20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 PLEKHH3Q7Z736 793 aa20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 REPS2Q8NFH8 660 aa20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 CTDP1Q9Y5B0 961 aaPredicted RBP20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 COL11A1P12107 1806 aaPredicted RBP20.48■□□□□ 0.87
CHRDL2-206ENST00000528789 ZBED4O75132 1171 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 CAPN15O75808 1086 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 SLC16A2P36021 539 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 SLC4A3P48751 1232 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 SNAP25P60880 206 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 FAM160B2Q86V87 743 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 NCAPG2Q86XI2 1143 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 CHURC1Q8WUH1 139 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 SENP2Q9HC62 589 aa20.47■□□□□ 0.87
CHRDL2-206ENST00000528789 ERICH2A1L162 156 aa20.46■□□□□ 0.87
CHRDL2-206ENST00000528789 CCDC85CA6NKD9 419 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms