RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 A0A1W2PQD8 194 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 CLRN2A0PK11 232 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 CALM1P0DP23 149 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 CALM2P0DP24 149 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 CALM3P0DP25 149 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 XBP1P17861 261 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 GRK4P32298 578 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 ADD1P35611 737 aaKnown RBP13.56□□□□□ -0.24
USF1-208ENST00000528768 TNNI2P48788 182 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 UBXN2AP68543 259 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 GSTO1P78417 241 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 CTDSPL2Q05D32 466 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 TYRO3Q06418 890 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 ZRSR1Q15695 479 aaKnown RBP13.56□□□□□ -0.24
USF1-208ENST00000528768 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
USF1-208ENST00000528768 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.56□□□□□ -0.24
USF1-208ENST00000528768 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 MICU3Q86XE3 530 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 MIGA1Q8NAN2 632 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 PRMT6Q96LA8 375 aaPredicted RBP13.56□□□□□ -0.24
USF1-208ENST00000528768 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 NOL10Q9BSC4 688 aaKnown RBP13.56□□□□□ -0.24
USF1-208ENST00000528768 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 SRRDQ9UH36 339 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 NID2Q14112 1375 aa13.56□□□□□ -0.24
USF1-208ENST00000528768 MINDY4BA8MYZ0 360 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 IFNAR1P17181 557 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.24
USF1-208ENST00000528768 AKAP17AQ02040 695 aaKnown RBP13.55□□□□□ -0.24
USF1-208ENST00000528768 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
USF1-208ENST00000528768 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 RTN1Q16799 776 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 ADALQ6DHV7 355 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 RBM43Q6ZSC3 357 aaKnown RBP13.55□□□□□ -0.24
USF1-208ENST00000528768 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 AMOTL1Q8IY63 956 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 CERS5Q8N5B7 392 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 WDR66Q8TBY9 1149 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 RAET1EQ8TD07 263 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 MRPS27Q92552 414 aaKnown RBP13.55□□□□□ -0.24
USF1-208ENST00000528768 HOOK2Q96ED9 719 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 PGBD1Q96JS3 809 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 USP28Q96RU2 1077 aa13.55□□□□□ -0.24
USF1-208ENST00000528768 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
USF1-208ENST00000528768 IQSEC3Q9UPP2 1182 aaPredicted RBP13.55□□□□□ -0.24
USF1-208ENST00000528768 SPDYE5A6NIY4 337 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 PRKAB2O43741 272 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 EVI5O60447 810 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 FMNL1O95466 1100 aaPredicted RBP13.54□□□□□ -0.24
USF1-208ENST00000528768 LDHCP07864 332 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 IL1R1P14778 569 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 SNAPC2Q13487 334 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 VGLL4Q14135 290 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 MTFR1Q15390 333 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.54□□□□□ -0.24
USF1-208ENST00000528768 RNF208Q9H0X6 261 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 ATP8A2Q9NTI2 1148 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
USF1-208ENST00000528768 OTOFQ9HC10 1997 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 SPTLC2O15270 562 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 FARP2O94887 1054 aaPredicted RBP13.53□□□□□ -0.24
USF1-208ENST00000528768 CCL5P13501 91 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 CAMK4Q16566 473 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 KRT40Q6A162 431 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 CATIPQ7Z7H3 387 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 DZIP1Q86YF9 867 aaKnown RBP13.53□□□□□ -0.24
USF1-208ENST00000528768 RIOK1Q9BRS2 568 aaKnown RBP13.53□□□□□ -0.24
USF1-208ENST00000528768 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
USF1-208ENST00000528768 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
USF1-208ENST00000528768 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
USF1-208ENST00000528768 ZNF70Q9UC06 446 aaPredicted RBP13.53□□□□□ -0.24
USF1-208ENST00000528768 STXBP5LQ9Y2K9 1186 aa13.53□□□□□ -0.24
USF1-208ENST00000528768 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
USF1-208ENST00000528768 NR1I2O75469 434 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 DEXIO95424 95 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 ADCY5O95622 1261 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 BAG3O95817 575 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 KLRK1P26718 216 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 BMP8BP34820 402 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 PSMC4P43686 418 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 PDE4BQ07343 736 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 CHAF1AQ13111 956 aaPredicted RBP13.52□□□□□ -0.25
USF1-208ENST00000528768 STX1AQ16623 288 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 C17orf99Q6UX52 265 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 LINC00301Q8NCQ3 95 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 U2AF1L4Q8WU68 220 aaKnown RBP13.52□□□□□ -0.25
USF1-208ENST00000528768 NSUN4Q96CB9 384 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms