RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 WDR24Q96S15 920 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 MTRQ99707 1265 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 DESI2Q9BSY9 194 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 CARD6Q9BX69 1037 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 SRRTQ9BXP5 876 aaKnown RBP11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 GTPBP4Q9BZE4 634 aaKnown RBP11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 CTNND2Q9UQB3 1225 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 BAZ2BQ9UIF8 2168 aaKnown RBP11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 CASZ1Q86V15 1759 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 CALML3P27482 149 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 PBX1P40424 430 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 FILIP1LQ4L180 1135 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 C4orf32Q8N8J7 132 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 MNS1Q8NEH6 495 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 UBXN4Q92575 508 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 PANX2Q96RD6 677 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 ZNF446Q9NWS9 450 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 MKRN1Q9UHC7 482 aaKnown RBP11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 IRS2Q9Y4H2 1338 aa11.91□□□□□ -0.5
AP002008.3-201ENST00000528614 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 SLC51AQ86UW1 340 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 DGKHQ86XP1 1220 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 MKNK2Q9HBH9 465 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 FAM53CQ9NYF3 392 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 FAM205AQ6ZU69 1335 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 LDHBP07195 334 aaKnown RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 CDC25AP30304 524 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 KARSQ15046 597 aaKnown RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 ARL6IP4Q66PJ3 421 aaKnown RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 RASGRP4Q8TDF6 673 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 PYM1Q9BRP8 204 aaKnown RBP11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 PCDHA4Q9UN74 947 aa11.9□□□□□ -0.5
AP002008.3-201ENST00000528614 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 TADA3O75528 432 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 LONP1P36776 959 aaKnown RBP11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 RAD9BQ6WBX8 426 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 KRT222Q8N1A0 295 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 ANKS1AQ92625 1134 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 MRPL44Q9H9J2 332 aaKnown RBP11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 RTCBQ9Y3I0 505 aaKnown RBP11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 IGSF3O75054 1194 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 CLCN6P51797 869 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 GRM4Q14833 912 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 GRIK5Q16478 980 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 TYW1BQ6NUM6 668 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 WDR66Q8TBY9 1149 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 MAD2L2Q9UI95 211 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 RWDD2AQ9UIY3 292 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 MTMR7Q9Y216 660 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 ZNF831Q5JPB2 1677 aa11.89□□□□□ -0.51
AP002008.3-201ENST00000528614 EFCAB8A8MWE9 144 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 CCDC175P0C221 793 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 CASP14P31944 242 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 CCT6AP40227 531 aaKnown RBP11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 KRT31Q15323 416 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 TGFBRAP1Q8WUH2 860 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 NAA15Q9BXJ9 866 aaKnown RBP11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 LIMA1Q9UHB6 759 aaKnown RBP11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 ADGRG1Q9Y653 693 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 KIAA1551Q9HCM1 1747 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 MFAP3LO75121 409 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 RPN1P04843 607 aaKnown RBP11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 TSPY3P0CV98 308 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 TSPY8P0CW00 308 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 GNAQP50148 359 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 SLC35G1Q2M3R5 365 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 ZNF444Q8N0Y2 327 aaPredicted RBP11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 NELFBQ8WX92 580 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 VPS16Q9H269 839 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 PCDHA6Q9UN73 950 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 PCDHA8Q9Y5H6 950 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 LAMB1P07942 1786 aa11.88□□□□□ -0.51
AP002008.3-201ENST00000528614 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 LRRC10BA6NIK2 292 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 M0R2N6 131 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 N4BP3O15049 544 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 ZBTB22O15209 634 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 GYPCP04921 128 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 TXLNAP40222 546 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 STAT6P42226 847 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 FXR1P51114 621 aaKnown RBP eCLIP11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 PAK1Q13153 545 aa11.87□□□□□ -0.51
AP002008.3-201ENST00000528614 BMS1Q14692 1282 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms