RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 RASA1P20936 1047 aa13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 TRIM32Q13049 653 aa13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 IMMTQ16891 758 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 ABCB5Q2M3G0 1257 aa13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 ZNF280CQ8ND82 737 aa13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 MYLIPQ8WY64 445 aa13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 CTNNA3Q9UI47 895 aa13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 TAF6LQ9Y6J9 622 aa13.68□□□□□ -0.22
CCDC90B-210ENST00000528149 DNAH12Q6ZR08 3092 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 NEDD4P46934 1319 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 SEC24BO95487 1268 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 HMGCRP04035 888 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 OGDHLQ9ULD0 1010 aa13.67□□□□□ -0.22
CCDC90B-210ENST00000528149 CXCL11O14625 94 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 ZNF213O14771 459 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 SLC27A2O14975 620 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 SLC3A2P08195 630 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 CYP21A2P08686 494 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 KCNA4P22459 653 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 LRRC26Q2I0M4 334 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 FAM47AQ5JRC9 791 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 RRP12Q5JTH9 1297 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 COA7Q96BR5 231 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 SEMA6BQ9H3T3 888 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC90B-210ENST00000528149 ASNSP08243 561 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 FOSL2P15408 326 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 PDE4BQ07343 736 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 TJAP1Q5JTD0 557 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 AKNAD1Q5T1N1 836 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 CREB3L3Q68CJ9 461 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 STOX1Q6ZVD7 989 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 SMCR8Q8TEV9 937 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 WDR18Q9BV38 432 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 HMX1Q9NP08 348 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 AGTPBP1Q9UPW5 1226 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 BDP1A6H8Y1 2624 aa13.65□□□□□ -0.22
CCDC90B-210ENST00000528149 NMT2O60551 498 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 COL6A1P12109 1028 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 BACE1P56817 501 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 ANKRD13CQ8N6S4 541 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 TTYH1Q9H313 450 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 MKNK2Q9HBH9 465 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 RLFQ13129 1914 aa13.64□□□□□ -0.23
CCDC90B-210ENST00000528149 PLIN4Q96Q06 1357 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 LTBP2Q14767 1821 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 PARP14Q460N5 1801 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 B4E1Z4 1266 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 SPICE1Q8N0Z3 855 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 USP38Q8NB14 1042 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 FEZ1Q99689 392 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 ASCC2Q9H1I8 757 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
CCDC90B-210ENST00000528149 PIEZO1Q92508 2521 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 USP17L10C9JJH3 530 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 E7EWF7 191 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 ORC4O43929 436 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 RANBP6O60518 1105 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 FGRP09769 529 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 EEF2P13639 858 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 VCAM1P19320 739 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 HSPA4P34932 840 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 ATP2B2Q01814 1243 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 FASTKD5Q7L8L6 764 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 LRRC47Q8N1G4 583 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 TRIB2Q92519 343 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 SLC45A1Q9Y2W3 748 aa13.62□□□□□ -0.23
CCDC90B-210ENST00000528149 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 IGKV6D-41A0A0C4DH26 115 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 TSPY2A6NKD2 308 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 CNMDO75829 334 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 ICA1Q05084 483 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 TMEM179Q6ZVK1 233 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 ZNF444Q8N0Y2 327 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 CCDC17Q96LX7 622 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 P2RX7Q99572 595 aaKnown RBP13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 AS3MTQ9HBK9 375 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 CABP5Q9NP86 173 aa13.61□□□□□ -0.23
CCDC90B-210ENST00000528149 EPB41L2O43491 1005 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 KDM4AO75164 1064 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms