RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PPP4R3BQ5MIZ7 849 aa39.25■■■■□ 3.87
SSSCA1-205ENST00000527920 CLIP2Q9UDT6 1046 aa39.25■■■■□ 3.87
SSSCA1-205ENST00000527920 F5H6K3 240 aa39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 SGPL1O95470 568 aa39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 HSPD1P10809 573 aaKnown RBP39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 TFAP4Q01664 338 aa39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 KLRC3Q07444 240 aa39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 GRB14Q14449 540 aa39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 FAM83BQ5T0W9 1011 aa39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 PPP1R9AQ9ULJ8 1098 aa39.24■■■■□ 3.87
SSSCA1-205ENST00000527920 RPTORQ8N122 1335 aa39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 HIP1O00291 1037 aa39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 NDUFB10O96000 172 aa39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 FGAP02671 866 aa39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 HOXC6P09630 235 aa39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 ZKSCAN1P17029 563 aaPredicted RBP39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 MAP3K21Q5TCX8 1036 aa39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 WDR78Q5VTH9 848 aa39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 PRPF38BQ5VTL8 546 aaKnown RBP39.23■■■■□ 3.87
SSSCA1-205ENST00000527920 STRNO43815 780 aa39.22■■■■□ 3.87
SSSCA1-205ENST00000527920 FGRP09769 529 aa39.22■■■■□ 3.87
SSSCA1-205ENST00000527920 XRN2Q9H0D6 950 aaKnown RBP eCLIP39.22■■■■□ 3.871e-6■■■□□ 16.7
SSSCA1-205ENST00000527920 PARP14Q460N5 1801 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 ORC4O43929 436 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 RAD21O60216 631 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 CTDSPL2Q05D32 466 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 FAM47AQ5JRC9 791 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 UBE2Q1Q7Z7E8 422 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 GMCL1P1Q8NEA9 526 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 MROH8Q9H579 483 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 HMX1Q9NP08 348 aaPredicted RBP39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 FBXO28Q9NVF7 368 aa39.21■■■■□ 3.87
SSSCA1-205ENST00000527920 DEFB118Q96PH6 123 aa39.2■■■■□ 3.87
SSSCA1-205ENST00000527920 DIAPH3Q9NSV4 1193 aa39.2■■■■□ 3.87
SSSCA1-205ENST00000527920 ERCC3P19447 782 aa39.19■■■■□ 3.86
SSSCA1-205ENST00000527920 PDE4AP27815 886 aa39.19■■■■□ 3.86
SSSCA1-205ENST00000527920 CRISPLD2Q9H0B8 497 aa39.19■■■■□ 3.86
SSSCA1-205ENST00000527920 VWA5AO00534 786 aa39.18■■■■□ 3.86
SSSCA1-205ENST00000527920 SLC25A27O95847 323 aa39.18■■■■□ 3.86
SSSCA1-205ENST00000527920 TRIM32Q13049 653 aa39.18■■■■□ 3.86
SSSCA1-205ENST00000527920 TMEM132BQ14DG7 1078 aa39.18■■■■□ 3.86
SSSCA1-205ENST00000527920 ABRAQ8N0Z2 381 aa39.18■■■■□ 3.86
SSSCA1-205ENST00000527920 SLF1Q9BQI6 1058 aa39.18■■■■□ 3.86
SSSCA1-205ENST00000527920 ZNF236Q9UL36 1845 aa39.18■■■■□ 3.86
SSSCA1-205ENST00000527920 TSPY2A6NKD2 308 aa39.17■■■■□ 3.86
SSSCA1-205ENST00000527920 PRKAR2AP13861 404 aaKnown RBP39.17■■■■□ 3.86
SSSCA1-205ENST00000527920 PLS1Q14651 629 aa39.16■■■■□ 3.86
SSSCA1-205ENST00000527920 CCL14Q16627 93 aa39.16■■■■□ 3.86
SSSCA1-205ENST00000527920 NUP88Q99567 741 aaPredicted RBP39.16■■■■□ 3.86
SSSCA1-205ENST00000527920 PCP11498 1178 aaKnown RBP39.15■■■■□ 3.86
SSSCA1-205ENST00000527920 REPS2Q8NFH8 660 aa39.15■■■■□ 3.86
SSSCA1-205ENST00000527920 TACC3Q9Y6A5 838 aa39.15■■■■□ 3.86
SSSCA1-205ENST00000527920 MYH4Q9Y623 1939 aa39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 COPB2P35606 906 aa39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 SAMD1Q6SPF0 538 aaPredicted RBP39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 CWC27Q6UX04 472 aaKnown RBP39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 RIOX2Q8IUF8 465 aa39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 LRRC47Q8N1G4 583 aaKnown RBP39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 PRPF38AQ8NAV1 312 aaKnown RBP39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 INCENPQ9NQS7 918 aa39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 ZNF214Q9UL59 606 aaPredicted RBP39.14■■■■□ 3.86
SSSCA1-205ENST00000527920 NOVP48745 357 aa39.13■■■■□ 3.85
SSSCA1-205ENST00000527920 TTC22Q5TAA0 569 aa39.13■■■■□ 3.85
SSSCA1-205ENST00000527920 RANBP6O60518 1105 aaKnown RBP39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 FARP2O94887 1054 aaPredicted RBP39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 TFRCP02786 760 aaKnown RBP39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 ADORA2AP29274 412 aa39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 CACNB2Q08289 660 aaPredicted RBP39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 NCAPG2Q86XI2 1143 aa39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 IL17RBQ9NRM6 502 aa39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 FEM1BQ9UK73 627 aa39.12■■■■□ 3.85
SSSCA1-205ENST00000527920 IGHA2P01877 340 aa39.11■■■■□ 3.85
SSSCA1-205ENST00000527920 STAT3P40763 770 aa39.11■■■■□ 3.85
SSSCA1-205ENST00000527920 MFSD14CQ5VZR4 134 aa39.11■■■■□ 3.85
SSSCA1-205ENST00000527920 SLFN13Q68D06 897 aa39.11■■■■□ 3.85
SSSCA1-205ENST00000527920 GMCL1Q96IK5 515 aa39.11■■■■□ 3.85
SSSCA1-205ENST00000527920 ATP2A1O14983 1001 aa39.1■■■■□ 3.85
SSSCA1-205ENST00000527920 ANKLE1Q8NAG6 615 aa39.1■■■■□ 3.85
SSSCA1-205ENST00000527920 SLC5A4Q9NY91 659 aa39.1■■■■□ 3.85
SSSCA1-205ENST00000527920 FLRT1Q9NZU1 646 aa39.1■■■■□ 3.85
SSSCA1-205ENST00000527920 GSPT1P15170 499 aaKnown RBP39.09■■■■□ 3.85
SSSCA1-205ENST00000527920 NT5C2P49902 561 aa39.09■■■■□ 3.85
SSSCA1-205ENST00000527920 DPP9Q86TI2 863 aa39.09■■■■□ 3.85
SSSCA1-205ENST00000527920 NPLOC4Q8TAT6 608 aa39.09■■■■□ 3.85
SSSCA1-205ENST00000527920 STAG1Q8WVM7 1258 aa39.09■■■■□ 3.85
SSSCA1-205ENST00000527920 TEX13BQ9BXU2 312 aa39.09■■■■□ 3.85
SSSCA1-205ENST00000527920 STX8Q9UNK0 236 aa39.09■■■■□ 3.85
SSSCA1-205ENST00000527920 FCER1AP12319 257 aa39.08■■■■□ 3.85
SSSCA1-205ENST00000527920 BMP3P12645 472 aa39.08■■■■□ 3.85
SSSCA1-205ENST00000527920 AKNAD1Q5T1N1 836 aa39.08■■■■□ 3.85
SSSCA1-205ENST00000527920 OLFML2BQ68BL8 750 aa39.08■■■■□ 3.85
SSSCA1-205ENST00000527920 RNF41Q9H4P4 317 aaPredicted RBP39.08■■■■□ 3.85
SSSCA1-205ENST00000527920 TCP11L1Q9NUJ3 509 aa39.08■■■■□ 3.85
SSSCA1-205ENST00000527920 DSCC1Q9BVC3 393 aa39.07■■■■□ 3.85
SSSCA1-205ENST00000527920 NBPF3Q9H094 633 aa39.07■■■■□ 3.85
SSSCA1-205ENST00000527920 COL11A1P12107 1806 aaPredicted RBP39.06■■■■□ 3.84
SSSCA1-205ENST00000527920 HTATIP2Q9BUP3 242 aa39.06■■■■□ 3.84
SSSCA1-205ENST00000527920 TOMM22Q9NS69 142 aa39.06■■■■□ 3.84
SSSCA1-205ENST00000527920 OGDHLQ9ULD0 1010 aa39.06■■■■□ 3.84
SSSCA1-205ENST00000527920 NMT2O60551 498 aa39.05■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 247.4 ms