RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 ATG4CQ96DT6 458 aa14.92□□□□□ -0.02
SRPRA-202ENST00000527817 MCM9Q9NXL9 1143 aa14.92□□□□□ -0.02
SRPRA-202ENST00000527817 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
SRPRA-202ENST00000527817 ZNF865P0CJ78 1059 aaPredicted RBP14.91□□□□□ -0.02
SRPRA-202ENST00000527817 TMEM132BQ14DG7 1078 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 RIOX2Q8IUF8 465 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 TMEM57Q8N5G2 664 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 SLC44A5Q8NCS7 719 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 MMP19Q99542 508 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 SH2D4AQ9H788 454 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 VCPKMTQ9H867 229 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 ARHGEF10LQ9HCE6 1279 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 SWAP70Q9UH65 585 aa14.91□□□□□ -0.02
SRPRA-202ENST00000527817 WDR46O15213 610 aaKnown RBP14.9□□□□□ -0.02
SRPRA-202ENST00000527817 TIMP1P01033 207 aa14.9□□□□□ -0.02
SRPRA-202ENST00000527817 AKR1A1P14550 325 aa14.9□□□□□ -0.02
SRPRA-202ENST00000527817 TAL1P17542 331 aaPredicted RBP14.9□□□□□ -0.02
SRPRA-202ENST00000527817 EVX2Q03828 476 aa14.9□□□□□ -0.02
SRPRA-202ENST00000527817 TTF1Q15361 905 aaPredicted RBP14.9□□□□□ -0.02
SRPRA-202ENST00000527817 NUP133Q8WUM0 1156 aa14.9□□□□□ -0.02
SRPRA-202ENST00000527817 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
SRPRA-202ENST00000527817 TIFAQ96CG3 184 aa14.9□□□□□ -0.02
SRPRA-202ENST00000527817 DCP1AQ9NPI6 582 aaPredicted RBP14.9□□□□□ -0.02
SRPRA-202ENST00000527817 A0A0G2JMZ2 1700 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 MOXD2PA6NHM9 499 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 ADAMTS4O75173 837 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 PGK2P07205 417 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 STAT3P40763 770 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 ACLYP53396 1101 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 KCTD2Q14681 263 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 AKNAD1Q5T1N1 836 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 SLC9C2Q5TAH2 1124 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 MFSD5Q6N075 450 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 SPICE1Q8N0Z3 855 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 MSL3Q8N5Y2 521 aaKnown RBP14.89□□□□□ -0.03
SRPRA-202ENST00000527817 KLHDC9Q8NEP7 349 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 CCDC17Q96LX7 622 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.89□□□□□ -0.033e-7■■□□□ 12.6
SRPRA-202ENST00000527817 STARD7Q9NQZ5 370 aa14.89□□□□□ -0.03
SRPRA-202ENST00000527817 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 BDP1A6H8Y1 2624 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 PDE6AP16499 860 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 COPB2P35606 906 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 ICA1Q05084 483 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 TMEM240Q5SV17 173 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 RASIP1Q5U651 963 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 CCSAPQ6IQ19 270 aaPredicted RBP14.88□□□□□ -0.03
SRPRA-202ENST00000527817 CCDC174Q6PII3 467 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 C16orf59Q7L2K0 433 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 GAS2L1Q99501 681 aaPredicted RBP14.88□□□□□ -0.03
SRPRA-202ENST00000527817 TBX21Q9UL17 535 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 FAM184BQ9ULE4 1060 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 CNPY2Q9Y2B0 182 aa14.88□□□□□ -0.03
SRPRA-202ENST00000527817 CHD9Q3L8U1 2897 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 VWA5AO00534 786 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 AKR1B1P15121 316 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 CDK7P50613 346 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 PPIGQ13427 754 aaKnown RBP eCLIP14.87□□□□□ -0.03
SRPRA-202ENST00000527817 KCNA10Q16322 511 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 ZKSCAN2Q63HK3 967 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
SRPRA-202ENST00000527817 SDR42E1Q8WUS8 393 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 DYNLL2Q96FJ2 89 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 ELP1O95163 1332 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 MROH7Q68CQ1 1323 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 ZNF532Q9HCE3 1301 aa14.87□□□□□ -0.03
SRPRA-202ENST00000527817 TCRBV5S4A2TA0A5A2 114 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 DUSP11O75319 330 aaKnown RBP14.86□□□□□ -0.03
SRPRA-202ENST00000527817 CYP2D6P10635 497 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 MAMDC4Q6UXC1 1216 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 AACSQ86V21 672 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 ERC1Q8IUD2 1116 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 REPS2Q8NFH8 660 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 ASB2Q96Q27 587 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 PBX4Q9BYU1 374 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 ATP8A2Q9NTI2 1148 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 FBXO28Q9NVF7 368 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
SRPRA-202ENST00000527817 PPP1R9AQ9ULJ8 1098 aa14.86□□□□□ -0.03
SRPRA-202ENST00000527817 SNAI1O95863 264 aaPredicted RBP14.85□□□□□ -0.03
SRPRA-202ENST00000527817 EEF2P13639 858 aaKnown RBP14.85□□□□□ -0.03
SRPRA-202ENST00000527817 CST5P28325 142 aaPredicted RBP14.85□□□□□ -0.03
SRPRA-202ENST00000527817 CDK8P49336 464 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 MRPS5P82675 430 aaKnown RBP14.85□□□□□ -0.03
SRPRA-202ENST00000527817 CCDC129Q6ZRS4 1044 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 CLEC10AQ8IUN9 316 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 LCORLQ8N3X6 602 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.85□□□□□ -0.03
SRPRA-202ENST00000527817 LENG1Q96BZ8 264 aaPredicted RBP14.85□□□□□ -0.03
SRPRA-202ENST00000527817 PRDM12Q9H4Q4 367 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 KANSL2Q9H9L4 492 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 SYNGAP1Q96PV0 1343 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 SYNRGQ9UMZ2 1314 aa14.85□□□□□ -0.03
SRPRA-202ENST00000527817 PLXNA1Q9UIW2 1896 aa14.84□□□□□ -0.03
SRPRA-202ENST00000527817 GRXCR1A8MXD5 290 aa14.84□□□□□ -0.03
SRPRA-202ENST00000527817 PBX2P40425 430 aa14.84□□□□□ -0.03
SRPRA-202ENST00000527817 C12orf60Q5U649 245 aa14.84□□□□□ -0.03
SRPRA-202ENST00000527817 TMEM199Q8N511 208 aa14.84□□□□□ -0.03
SRPRA-202ENST00000527817 PCSK9Q8NBP7 692 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms