RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 TANGO6Q9C0B7 1094 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 ARMT1Q9H993 441 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 MCM9Q9NXL9 1143 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 IVNS1ABPQ9Y6Y0 642 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
CAPN1-210ENST00000527699 LRRC37A2A6NM11 1700 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 PI4K2BG5E9Z4 385 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 RAD21O60216 631 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 PDE6AP16499 860 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 PBX2P40425 430 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 USP14P54578 494 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 CCNA1P78396 465 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 TRIM60Q495X7 471 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
CAPN1-210ENST00000527699 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 RHPN1Q8TCX5 695 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 C12orf42Q96LP6 360 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 KIAA1683Q9H0B3 1180 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 PDLIM7Q9NR12 457 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 GINM1Q9NU53 330 aa12□□□□□ -0.49
CAPN1-210ENST00000527699 TRIM43BA6NCK2 446 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 SLC15A5A6NIM6 579 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 GLRX3O76003 335 aaKnown RBP11.99□□□□□ -0.49
CAPN1-210ENST00000527699 EPHB4P54760 987 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 DPP9Q86TI2 863 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 GTF3C2Q8WUA4 911 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-210ENST00000527699 TRIM43Q96BQ3 446 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-210ENST00000527699 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 MOV10L1Q9BXT6 1211 aaKnown RBP11.99□□□□□ -0.49
CAPN1-210ENST00000527699 PBX4Q9BYU1 374 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
CAPN1-210ENST00000527699 EHD4Q9H223 541 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 BOLA2Q9H3K6 86 aa11.99□□□□□ -0.49
CAPN1-210ENST00000527699 DDX20Q9UHI6 824 aaKnown RBP11.99□□□□□ -0.49
CAPN1-210ENST00000527699 SPTBN4Q9H254 2564 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 GRXCR1A8MXD5 290 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 COBLO75128 1261 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 AKR1B1P15121 316 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 ADORA2AP29274 412 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 FPGSQ05932 587 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 SLC39A5Q6ZMH5 540 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 NCAPG2Q86XI2 1143 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 FERMT2Q96AC1 680 aa11.98□□□□□ -0.49
CAPN1-210ENST00000527699 XIRP2A4UGR9 3374 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 DNM1LO00429 736 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 ERC2O15083 957 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 MBD4O95243 580 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 IFIT2P09913 472 aaKnown RBP11.97□□□□□ -0.49
CAPN1-210ENST00000527699 RAG1P15918 1043 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 ERCC3P19447 782 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 SLC4A3P48751 1232 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 GRB14Q14449 540 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 ERC1Q8IUD2 1116 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 ATG4CQ96DT6 458 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 KCNH6Q9H252 994 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 DCP1AQ9NPI6 582 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-210ENST00000527699 MSRAQ9UJ68 235 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 COG6Q9Y2V7 657 aa11.97□□□□□ -0.49
CAPN1-210ENST00000527699 WDFY4Q6ZS81 3184 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 CFAP54Q96N23 3096 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 RLFQ13129 1914 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 NAV1Q8NEY1 1877 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 TCRBV5S4A2TA0A5A2 114 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 KBTBD13C9JR72 458 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 FLOT1O75955 427 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 GABPAQ06546 454 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 COG2Q14746 738 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 TTF1Q15361 905 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-210ENST00000527699 LBX2Q6XYB7 198 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 CLASRPQ8N2M8 674 aaKnown RBP11.96□□□□□ -0.49
CAPN1-210ENST00000527699 SPATC1LQ9H0A9 340 aa11.96□□□□□ -0.49
CAPN1-210ENST00000527699 TLL1O43897 1013 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-210ENST00000527699 CYBAP13498 195 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 ICA1Q05084 483 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 SIAH1Q8IUQ4 282 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 HERVK_113Q902F9 699 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 LPAR1Q92633 364 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 SLC28A3Q9HAS3 691 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 PAG1Q9NWQ8 432 aa11.95□□□□□ -0.5
CAPN1-210ENST00000527699 KRT37O76014 449 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 PGK2P07205 417 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 ITGB8P26012 769 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-210ENST00000527699 DSG3P32926 999 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 ADCYAP1R1P41586 468 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 CDK8P49336 464 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 CERS3Q8IU89 383 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 LENG1Q96BZ8 264 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-210ENST00000527699 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 KIF1BPQ96EK5 621 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 NKX2-4Q9H2Z4 354 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
CAPN1-210ENST00000527699 REV3LO60673 3130 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 PRRC2BQ5JSZ5 2229 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms