RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 KIF23Q02241 960 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-205ENST00000526954 ZNF543Q08ER8 600 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 SREBF2Q12772 1141 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 GRM4Q14833 912 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 TREML2Q5T2D2 321 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 ANKRD23Q86SG2 305 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 ZIC5Q96T25 663 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 PTPN18Q99952 460 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 ZCCHC17Q9NP64 241 aaKnown RBP19.3■□□□□ 0.68
CAPN1-205ENST00000526954 NID2Q14112 1375 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 RLFQ13129 1914 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L15C9J2P7 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L13C9JLJ4 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L11C9JVI0 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L18D6R9N7 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L22D6RA61 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L17D6RBQ6 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L19D6RCP7 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L20D6RJB6 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 PLA2G6O60733 806 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 AOC2O75106 756 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 PDIA3P30101 505 aaKnown RBP19.29■□□□□ 0.68
CAPN1-205ENST00000526954 USP17L24Q0WX57 530 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 GRM1Q13255 1194 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 ASPRV1Q53RT3 343 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 GPATCH4Q5T3I0 446 aaKnown RBP19.29■□□□□ 0.68
CAPN1-205ENST00000526954 CATSPERGQ6ZRH7 1159 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 MYL10Q9BUA6 226 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 RPAP3Q9H6T3 665 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-205ENST00000526954 MTMR7Q9Y216 660 aa19.29■□□□□ 0.68
CAPN1-205ENST00000526954 PALM3A6NDB9 673 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-205ENST00000526954 BTBD19C9JJ37 291 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 PARP1P09874 1014 aaKnown RBP19.28■□□□□ 0.68
CAPN1-205ENST00000526954 PABPC4Q13310 644 aaKnown RBP eCLIP19.28■□□□□ 0.68
CAPN1-205ENST00000526954 PPP2R5BQ15173 497 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 RASGRP2Q7LDG7 609 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 FANCBQ8NB91 859 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 NUP88Q99567 741 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-205ENST00000526954 MAD2L2Q9UI95 211 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 TPCN1Q9ULQ1 816 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 HPS5Q9UPZ3 1129 aa19.28■□□□□ 0.68
CAPN1-205ENST00000526954 KIF5BP33176 963 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 MCM2P49736 904 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 CCDC96Q2M329 555 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 BTNL9Q6UXG8 535 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 KCTD1Q719H9 257 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 MICU3Q86XE3 530 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 IFNL1Q8IU54 200 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 FAM43AQ8N2R8 423 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-205ENST00000526954 LARP6Q9BRS8 491 aaKnown RBP19.27■□□□□ 0.68
CAPN1-205ENST00000526954 FEM1BQ9UK73 627 aa19.27■□□□□ 0.68
CAPN1-205ENST00000526954 GOLGA8BA8MQT2 603 aa19.26■□□□□ 0.67
CAPN1-205ENST00000526954 PDHXO00330 501 aa19.26■□□□□ 0.67
CAPN1-205ENST00000526954 IGF2BP3O00425 579 aaKnown RBP eCLIP19.26■□□□□ 0.67
CAPN1-205ENST00000526954 OTUD7BQ6GQQ9 843 aa19.26■□□□□ 0.67
CAPN1-205ENST00000526954 FAM160B2Q86V87 743 aa19.26■□□□□ 0.67
CAPN1-205ENST00000526954 CHURC1Q8WUH1 139 aa19.26■□□□□ 0.67
CAPN1-205ENST00000526954 TANGO6Q9C0B7 1094 aa19.26■□□□□ 0.67
CAPN1-205ENST00000526954 RBM28Q9NW13 759 aaKnown RBP19.26■□□□□ 0.67
CAPN1-205ENST00000526954 FRMPD2Q68DX3 1309 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-205ENST00000526954 MYPNQ86TC9 1320 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 GOLGA8AA7E2F4 631 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 CD2BP2O95400 341 aaKnown RBP19.25■□□□□ 0.67
CAPN1-205ENST00000526954 RXRAP19793 462 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 OSBPP22059 807 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 SMARCA1P28370 1054 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 GNAQP50148 359 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 METAP2P50579 478 aaKnown RBP eCLIP19.25■□□□□ 0.673e-8■■■■■ 34.2
CAPN1-205ENST00000526954 STAT2P52630 851 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 COG2Q14746 738 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 RTN1Q16799 776 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 STAG2Q8N3U4 1231 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 DNAJC5GQ8N7S2 189 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 CHMP4CQ96CF2 233 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 ZSCAN31Q96LW9 406 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-205ENST00000526954 ASCC2Q9H1I8 757 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-205ENST00000526954 GPCPD1Q9NPB8 672 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 FAM217BQ9NTX9 383 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-205ENST00000526954 PNMA3Q9UL41 463 aa19.25■□□□□ 0.67
CAPN1-205ENST00000526954 NAP1L2Q9ULW6 460 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-205ENST00000526954 CCDC196A0A1B0GTZ2 297 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 KLRF2D3W0D1 207 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 PFKFB2O60825 505 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 FLOT1O75955 427 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 GOLGA8HP0CJ92 632 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 ME3Q16798 604 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 TTBK2Q6IQ55 1244 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 RAB11FIP4Q86YS3 637 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
CAPN1-205ENST00000526954 SNX21Q969T3 373 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 LZTS2Q9BRK4 669 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 SH2B1Q9NRF2 756 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-205ENST00000526954 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 PPP1R9AQ9ULJ8 1098 aa19.24■□□□□ 0.67
CAPN1-205ENST00000526954 ADAMTS5Q9UNA0 930 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms