RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 ATP2B2Q01814 1243 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 SHROOM1Q2M3G4 852 aaPredicted RBP23.64■■□□□ 1.37
SMCO4-203ENST00000526869 CDAN1Q8IWY9 1227 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 ZNF713Q8N859 430 aaPredicted RBP23.64■■□□□ 1.37
SMCO4-203ENST00000526869 TRPM4Q8TD43 1214 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 SHISA4Q96DD7 197 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 RRP36Q96EU6 259 aaKnown RBP23.64■■□□□ 1.37
SMCO4-203ENST00000526869 GMCL1Q96IK5 515 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 USP28Q96RU2 1077 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 DEFB129Q9H1M3 183 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 POLR3EQ9NVU0 708 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 KCNJ14Q9UNX9 436 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 MTMR7Q9Y216 660 aa23.64■■□□□ 1.37
SMCO4-203ENST00000526869 hCG_1642624A0A1W2PR95 340 aa23.63■■□□□ 1.37
SMCO4-203ENST00000526869 GADD45BO75293 160 aaPredicted RBP23.63■■□□□ 1.37
SMCO4-203ENST00000526869 YEATS4O95619 227 aa23.63■■□□□ 1.37
SMCO4-203ENST00000526869 KRT2P35908 639 aa23.63■■□□□ 1.37
SMCO4-203ENST00000526869 GALNT17Q6IS24 598 aa23.63■■□□□ 1.37
SMCO4-203ENST00000526869 RASGRP2Q7LDG7 609 aa23.63■■□□□ 1.37
SMCO4-203ENST00000526869 CCDC148Q8NFR7 591 aa23.63■■□□□ 1.37
SMCO4-203ENST00000526869 ARHGEF10LQ9HCE6 1279 aa23.63■■□□□ 1.37
SMCO4-203ENST00000526869 ADARB2Q9NS39 739 aaKnown RBP23.63■■□□□ 1.37
SMCO4-203ENST00000526869 ASTN2O75129 1339 aaPredicted RBP23.62■■□□□ 1.37
SMCO4-203ENST00000526869 BTBD18B2RXH4 712 aa23.62■■□□□ 1.37
SMCO4-203ENST00000526869 GRIN3BO60391 1043 aa23.62■■□□□ 1.37
SMCO4-203ENST00000526869 ASNSP08243 561 aa23.62■■□□□ 1.37
SMCO4-203ENST00000526869 EPS15P42566 896 aa23.62■■□□□ 1.37
SMCO4-203ENST00000526869 NASPP49321 788 aaPredicted RBP23.62■■□□□ 1.37
SMCO4-203ENST00000526869 BARHL2Q9NY43 387 aa23.62■■□□□ 1.37
SMCO4-203ENST00000526869 DDNO94850 711 aaPredicted RBP23.61■■□□□ 1.37
SMCO4-203ENST00000526869 CCDC96Q2M329 555 aa23.61■■□□□ 1.37
SMCO4-203ENST00000526869 ANGEL2Q5VTE6 544 aaKnown RBP23.61■■□□□ 1.37
SMCO4-203ENST00000526869 DCAF15Q66K64 600 aa23.61■■□□□ 1.37
SMCO4-203ENST00000526869 SLFN13Q68D06 897 aa23.61■■□□□ 1.37
SMCO4-203ENST00000526869 DAGLBQ8NCG7 672 aa23.61■■□□□ 1.37
SMCO4-203ENST00000526869 CCDC12Q8WUD4 166 aaPredicted RBP23.61■■□□□ 1.37
SMCO4-203ENST00000526869 SH2D4AQ9H788 454 aa23.61■■□□□ 1.37
SMCO4-203ENST00000526869 SEC63Q9UGP8 760 aaKnown RBP23.61■■□□□ 1.37
SMCO4-203ENST00000526869 FRMPD2Q68DX3 1309 aaPredicted RBP23.6■■□□□ 1.37
SMCO4-203ENST00000526869 PHF20L1A8MW92 1017 aa23.6■■□□□ 1.37
SMCO4-203ENST00000526869 NPY5RQ15761 445 aa23.6■■□□□ 1.37
SMCO4-203ENST00000526869 MIGA2Q7L4E1 593 aa23.6■■□□□ 1.37
SMCO4-203ENST00000526869 L3MBTL3Q96JM7 780 aaPredicted RBP23.6■■□□□ 1.37
SMCO4-203ENST00000526869 TMX2Q9Y320 296 aa23.6■■□□□ 1.37
SMCO4-203ENST00000526869 ATAD5Q96QE3 1844 aa23.6■■□□□ 1.37
SMCO4-203ENST00000526869 F5H6K3 240 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 STXBP3O00186 592 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 NLRP5P59047 1200 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 KLRC3Q07444 240 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 RILPL1Q5EBL4 403 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 ANO1Q5XXA6 986 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 WWC2Q6AWC2 1192 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 KCNG4Q8TDN1 519 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 TNFRSF25Q93038 417 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 SYAP1Q96A49 352 aaPredicted RBP23.59■■□□□ 1.37
SMCO4-203ENST00000526869 MTMR8Q96EF0 704 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 GPCPD1Q9NPB8 672 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 GGA3Q9NZ52 723 aa23.59■■□□□ 1.37
SMCO4-203ENST00000526869 SLC1A4P43007 532 aa23.58■■□□□ 1.37
SMCO4-203ENST00000526869 HIRAP54198 1017 aaPredicted RBP23.58■■□□□ 1.37
SMCO4-203ENST00000526869 GPR162Q16538 588 aa23.58■■□□□ 1.37
SMCO4-203ENST00000526869 DPY19L2Q6NUT2 758 aa23.58■■□□□ 1.37
SMCO4-203ENST00000526869 PPP1R18Q6NYC8 613 aa23.58■■□□□ 1.37
SMCO4-203ENST00000526869 LINC00301Q8NCQ3 95 aa23.58■■□□□ 1.37
SMCO4-203ENST00000526869 ZNF341Q9BYN7 854 aa23.58■■□□□ 1.37
SMCO4-203ENST00000526869 GOPCQ9HD26 462 aa23.58■■□□□ 1.37
SMCO4-203ENST00000526869 BAZ2BQ9UIF8 2168 aaKnown RBP23.58■■□□□ 1.36
SMCO4-203ENST00000526869 ESYT2A0FGR8 921 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 GOLGA6L4A6NEF3 574 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 CTNND1O60716 968 aaKnown RBP23.57■■□□□ 1.36
SMCO4-203ENST00000526869 NDUFB10O96000 172 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 HEATR3Q7Z4Q2 680 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 OXER1Q8TDS5 423 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 PIBF1Q8WXW3 757 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 PIGSQ96S52 555 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 UBA5Q9GZZ9 404 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 ZNF112Q9UJU3 913 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 PCDHA4Q9UN74 947 aa23.57■■□□□ 1.36
SMCO4-203ENST00000526869 MORC2Q9Y6X9 1032 aaPredicted RBP23.57■■□□□ 1.36
SMCO4-203ENST00000526869 PNMA6FA0A0J9YX94 578 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 A0A1W2PRG0 241 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 VEGFAP15692 232 aaPredicted RBP23.56■■□□□ 1.36
SMCO4-203ENST00000526869 NR5A1Q13285 461 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 GSE1Q14687 1217 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 STK38Q15208 465 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 NBPF12Q5TAG4 269 aaPredicted RBP23.56■■□□□ 1.36
SMCO4-203ENST00000526869 CAVIN1Q6NZI2 390 aaKnown RBP23.56■■□□□ 1.36
SMCO4-203ENST00000526869 ADGRF4Q8IZF3 695 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 GPKOWQ92917 476 aaPredicted RBP eCLIP23.56■■□□□ 1.36
SMCO4-203ENST00000526869 FTOQ9C0B1 505 aaKnown RBP eCLIP23.56■■□□□ 1.36
SMCO4-203ENST00000526869 CPVLQ9H3G5 476 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 JMJD4Q9H9V9 463 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 CLIC4Q9Y696 253 aa23.56■■□□□ 1.36
SMCO4-203ENST00000526869 CEBPZQ03701 1054 aaKnown RBP23.55■■□□□ 1.36
SMCO4-203ENST00000526869 SLC39A14Q15043 492 aa23.55■■□□□ 1.36
SMCO4-203ENST00000526869 BTNL9Q6UXG8 535 aa23.55■■□□□ 1.36
SMCO4-203ENST00000526869 KCTD1Q719H9 257 aa23.55■■□□□ 1.36
SMCO4-203ENST00000526869 BLIDQ8IZY5 108 aa23.55■■□□□ 1.36
SMCO4-203ENST00000526869 PGBD1Q96JS3 809 aa23.55■■□□□ 1.36
SMCO4-203ENST00000526869 ZMYND12Q9H0C1 365 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms