RNA–Protein interactions for RNA: ENST00000526494.5

CAPRIN1-204, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-204ENST00000526494 FUT2Q10981 343 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 SPP2Q13103 211 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 LARP1BQ659C4 914 aaKnown RBP18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 KCTD1Q719H9 257 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 SPICE1Q8N0Z3 855 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 PIBF1Q8WXW3 757 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 NUP88Q99567 741 aaPredicted RBP18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 RNF26Q9BY78 433 aaPredicted RBP18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 KIAA1683Q9H0B3 1180 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 V9GY48 417 aaPredicted RBP18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 UTRNP46939 3433 aa18.4■□□□□ 0.54
CAPRIN1-204ENST00000526494 GREB1LQ9C091 1923 aaPredicted RBP18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 PRPF3O43395 683 aaKnown RBP18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 BMP3P12645 472 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 SYT1P21579 422 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 NUCB2P80303 420 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 MAP3K11Q16584 847 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 WASF1Q92558 559 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 ALG1Q9BT22 464 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 CPVLQ9H3G5 476 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 ELP3Q9H9T3 547 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 CNTNAP5Q8WYK1 1306 aa18.39■□□□□ 0.53
CAPRIN1-204ENST00000526494 hCG_1642624A0A1W2PR95 340 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 TRIM75PA6NK02 468 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 USP17L10C9JJH3 530 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 DEXIO95424 95 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 MTMR2Q13614 643 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 KIAA1755Q5JYT7 1200 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 TTBK2Q6IQ55 1244 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 CLMNQ96JQ2 1002 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 VAT1LQ9HCJ6 419 aa18.38■□□□□ 0.53
CAPRIN1-204ENST00000526494 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 H3BQV1 296 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 STX6O43752 255 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 SMARCA1P28370 1054 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 SLC16A2P36021 539 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 USP14P54578 494 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 FKBP1BP68106 108 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 PKP1Q13835 747 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 SLC35G1Q2M3R5 365 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 FAM83BQ5T0W9 1011 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 LDLRAD1Q5T700 205 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 C2orf69Q8N8R5 385 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 C8orf76Q96K31 380 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 AIFM3Q96NN9 605 aa18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 GBA2Q9HCG7 927 aaPredicted RBP18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 RBM27Q9P2N5 1060 aaKnown RBP18.37■□□□□ 0.53
CAPRIN1-204ENST00000526494 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 CYTH3O43739 400 aa18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 ITGBL1O95965 494 aaPredicted RBP18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 BACE1P56817 501 aa18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 TRIM29Q14134 588 aa18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 FOXD4L5Q5VV16 416 aaPredicted RBP18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 ERO1BQ86YB8 467 aa18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 FOXD4L4Q8WXT5 416 aaPredicted RBP18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 LPAR1Q92633 364 aa18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 RRP36Q96EU6 259 aaKnown RBP18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 WDR33Q9C0J8 1336 aaKnown RBP18.36■□□□□ 0.53
CAPRIN1-204ENST00000526494 C19orf81C9J6K1 198 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 GUCY1B3Q02153 619 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 CNKSR2Q8WXI2 1034 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 OTUD5Q96G74 571 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 AFG3L2Q9Y4W6 797 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 MYH8P13535 1937 aa18.35■□□□□ 0.53
CAPRIN1-204ENST00000526494 SPDYE5A6NIY4 337 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 UNCXA6NJT0 531 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 KIF3CO14782 793 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 SCG2P13521 617 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 PPATQ06203 517 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 PKN1Q16512 942 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 SYDE2Q5VT97 1194 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 OTUD7BQ6GQQ9 843 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 ADGRF4Q8IZF3 695 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 PIGSQ96S52 555 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 RIOX1Q9H6W3 641 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 TMOD4Q9NZQ9 345 aa18.34■□□□□ 0.53
CAPRIN1-204ENST00000526494 WDR46O15213 610 aaKnown RBP18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 BRD1O95696 1058 aa18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 ZSCAN22P10073 491 aaPredicted RBP18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 XBP1P17861 261 aa18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 HMGCS2P54868 508 aa18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 DGKZQ13574 1117 aa18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 OPTNQ96CV9 577 aa18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.52
CAPRIN1-204ENST00000526494 GJB4Q9NTQ9 266 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms