RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 ZSCAN12O43309 604 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 CLEC17AQ6ZS10 378 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 MIGA2Q7L4E1 593 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 TXLNBQ8N3L3 684 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 CCDC112Q8NEF3 446 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 NEDD1Q8NHV4 660 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 STAMQ92783 540 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 ZNF830Q96NB3 372 aaPredicted RBP9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 HOMER2Q9NSB8 354 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 DDR1Q08345 913 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 R3HDM1Q15032 1099 aaKnown RBP9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 PTPN14Q15678 1187 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 CABP7Q86V35 215 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 CCDC150Q8NCX0 1101 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 ZNF408Q9H9D4 720 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 IFNKQ9P0W0 207 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 CSADQ9Y600 493 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 FAM196BA6NMK8 535 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 BMP3P12645 472 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 NLRP12P59046 1061 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 GAS2L3Q86XJ1 694 aa9.95□□□□□ -0.82
PPFIA1-206ENST00000526262 BICDL2A1A5D9 508 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 GH2P01242 217 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 TMEM87AQ8NBN3 555 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 DCPSQ96C86 337 aaKnown RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PDCL3Q9H2J4 239 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PARP4Q9UKK3 1724 aaKnown RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 GPR75-ASB3A0A0A6YYF3 556 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 hCG_1984214I3L0E3 225 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 OR52Z1P0C646 297 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 CHMP4BP1P59074 171 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PPP4CP60510 307 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PDE4DQ08499 809 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 HHIPL2Q6UWX4 724 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 ZNF713Q8N859 430 aaPredicted RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 UIMC1Q96RL1 719 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 TTC12Q9H892 705 aaPredicted RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 TRMT1Q9NXH9 659 aaKnown RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 MRPL11Q9Y3B7 192 aaKnown RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 FLT1P17948 1338 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 DISP2A7MBM2 1401 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PNOCQ13519 176 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 COA7Q96BR5 231 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 RIOK1Q9BRS2 568 aaKnown RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 MXD3Q9BW11 206 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 ZNRF3Q9ULT6 936 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PSDA5PKW4 1024 aaPredicted RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 KIF2AO00139 706 aaPredicted RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 CHMP2AO43633 222 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 EAPPQ56P03 285 aaPredicted RBP9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 KRBA2Q6ZNG9 492 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 KIAA1328Q86T90 577 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 CCDC65Q8IXS2 484 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 PCDHA12Q9UN75 941 aa9.94□□□□□ -0.82
PPFIA1-206ENST00000526262 FLOT1O75955 427 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 TRIM21P19474 475 aaKnown RBP9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 TECP42680 631 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 NCAPH2Q6IBW4 605 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 CAGE1Q8TC20 777 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 ZBTB21Q9ULJ3 1066 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 MAPK8IP1Q9UQF2 711 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 SLIT2O94813 1529 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 FAM13AO94988 1023 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 FOSP01100 380 aaPredicted RBP9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 SKILP12757 684 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 ALAS1P13196 640 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 DPEP1P16444 411 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 PPP1R2P41236 205 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 SPA17Q15506 151 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 HS1BP3Q53T59 392 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 CSRNP2Q9H175 543 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 PCDHB6Q9Y5E3 794 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 USP17L5A8MUK1 530 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 ASNSP08243 561 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 MYCLP12524 364 aaPredicted RBP9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 CETN1Q12798 172 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 PFKFB3Q16875 520 aaPredicted RBP9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 SUPT20HL1Q3ZLR7 823 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 OSBPL5Q9H0X9 879 aaPredicted RBP9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 ANAPC4Q9UJX5 808 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 ZKSCAN5Q9Y2L8 839 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.93□□□□□ -0.823e-7■■□□□ 11.9
PPFIA1-206ENST00000526262 RGPD1P0DJD0 1748 aa9.93□□□□□ -0.82
PPFIA1-206ENST00000526262 TCRBV5S4A2TA0A5A2 114 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 GCOM1H8Y6P7 765 aaPredicted RBP9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 POLR2MP0CAP2 368 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 LONP1P36776 959 aaKnown RBP9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 SP4Q02446 784 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 SEPT2Q15019 361 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 SYMPKQ92797 1274 aaKnown RBP9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 SCLT1Q96NL6 688 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 CPVLQ9H3G5 476 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 PRR16Q569H4 304 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 CDC42EP5Q6NZY7 148 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 CNNM4Q6P4Q7 775 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 TBCKQ8TEA7 893 aa9.92□□□□□ -0.82
PPFIA1-206ENST00000526262 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms