RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PSMC4P43686 418 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 TSGA10IPQ3SY00 556 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 FAM83BQ5T0W9 1011 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 RNF20Q5VTR2 975 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 SLFN13Q68D06 897 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 FBXO46Q6PJ61 603 aaPredicted RBP20.32■□□□□ 0.84
LMX1B-203ENST00000526117 NCOA7Q8NI08 942 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 TRIM47Q96LD4 638 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 ZSCAN10Q96SZ4 725 aaPredicted RBP20.32■□□□□ 0.84
LMX1B-203ENST00000526117 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 MCOLN1Q9GZU1 580 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 TXNRD2Q9NNW7 524 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 PPP1R9AQ9ULJ8 1098 aa20.32■□□□□ 0.84
LMX1B-203ENST00000526117 FDX1P10109 184 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 HOXD10P28358 340 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 CREB3L3Q68CJ9 461 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 STOX1Q6ZVD7 989 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 DCAF4Q8WV16 495 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 ARHGAP39Q9C0H5 1083 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 FEM1BQ9UK73 627 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 TRIM17Q9Y577 477 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 TAF6LQ9Y6J9 622 aa20.31■□□□□ 0.84
LMX1B-203ENST00000526117 ZSWIM8A7E2V4 1837 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 SNHG28P0DPA3 235 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 BMP3P12645 472 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 MAPK4P31152 587 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 CCNA1P78396 465 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 RALYLQ86SE5 291 aaKnown RBP20.3■□□□□ 0.84
LMX1B-203ENST00000526117 ENAHQ8N8S7 591 aaPredicted RBP20.3■□□□□ 0.84
LMX1B-203ENST00000526117 PRPF38AQ8NAV1 312 aaKnown RBP20.3■□□□□ 0.84
LMX1B-203ENST00000526117 KCNB2Q92953 911 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 SLF1Q9BQI6 1058 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 PTPN22Q9Y2R2 807 aa20.3■□□□□ 0.84
LMX1B-203ENST00000526117 TNKSO95271 1327 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 SLC1A4P43007 532 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 SEC23AQ15436 765 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 FAM160B2Q86V87 743 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 MB21D2Q8IYB1 491 aaPredicted RBP20.29■□□□□ 0.84
LMX1B-203ENST00000526117 SHCBP1Q8NEM2 672 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 UBAC1Q9BSL1 405 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 BTBD7Q9P203 1132 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 SRRDQ9UH36 339 aa20.29■□□□□ 0.84
LMX1B-203ENST00000526117 VWA5AO00534 786 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 ATP2A1O14983 1001 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 FMNL1O95466 1100 aaPredicted RBP20.28■□□□□ 0.84
LMX1B-203ENST00000526117 Q3C1V9 767 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 CYB5R4Q7L1T6 521 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 REPS2Q8NFH8 660 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 CHURC1Q8WUH1 139 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 ATG4CQ96DT6 458 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
LMX1B-203ENST00000526117 FBXO28Q9NVF7 368 aa20.28■□□□□ 0.84
LMX1B-203ENST00000526117 RAD21O60216 631 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 EIF5BO60841 1220 aaKnown RBP20.27■□□□□ 0.84
LMX1B-203ENST00000526117 PDHBP11177 359 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 STAT2P52630 851 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 BTNL9Q6UXG8 535 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 COA7Q96BR5 231 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 ZKSCAN3Q9BRR0 538 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 PAGR1Q9BTK6 254 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 SPATC1LQ9H0A9 340 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 ZNF236Q9UL36 1845 aa20.27■□□□□ 0.84
LMX1B-203ENST00000526117 TNPO2O14787 897 aaKnown RBP20.26■□□□□ 0.83
LMX1B-203ENST00000526117 ZKSCAN1P17029 563 aaPredicted RBP20.26■□□□□ 0.83
LMX1B-203ENST00000526117 MCCP23508 829 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 HSPA4P34932 840 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 COPB2P35606 906 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 OAZ1P54368 228 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 IRF5Q13568 498 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 KRT32Q14532 448 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 SART3Q15020 963 aaKnown RBP20.26■□□□□ 0.83
LMX1B-203ENST00000526117 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 KAT14Q9H8E8 782 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 ZNF214Q9UL59 606 aaPredicted RBP20.26■□□□□ 0.83
LMX1B-203ENST00000526117 WDR19Q8NEZ3 1342 aa20.26■□□□□ 0.83
LMX1B-203ENST00000526117 ANTXR2P58335 489 aa20.25■□□□□ 0.83
LMX1B-203ENST00000526117 TMEM132BQ14DG7 1078 aa20.25■□□□□ 0.83
LMX1B-203ENST00000526117 GPATCH4Q5T3I0 446 aaKnown RBP20.25■□□□□ 0.83
LMX1B-203ENST00000526117 IFIT1BQ5T764 474 aaKnown RBP20.25■□□□□ 0.83
LMX1B-203ENST00000526117 SOCS4Q8WXH5 440 aa20.25■□□□□ 0.83
LMX1B-203ENST00000526117 PORCNQ9H237 461 aa20.25■□□□□ 0.83
LMX1B-203ENST00000526117 SLC38A10Q9HBR0 1119 aa20.25■□□□□ 0.83
LMX1B-203ENST00000526117 COL11A1P12107 1806 aaPredicted RBP20.25■□□□□ 0.83
LMX1B-203ENST00000526117 ERICH2A1L162 156 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 TMEM232C9JQI7 657 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 SLC25A27O95847 323 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 MCM5P33992 734 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 ZNF543Q08ER8 600 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
LMX1B-203ENST00000526117 RIOX2Q8IUF8 465 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 IGDCC4Q8TDY8 1250 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 TMEM87BQ96K49 555 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 MOV10L1Q9BXT6 1211 aaKnown RBP20.24■□□□□ 0.83
LMX1B-203ENST00000526117 MROH8Q9H579 483 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 GJD2Q9UKL4 321 aa20.24■□□□□ 0.83
LMX1B-203ENST00000526117 PLXNB2O15031 1838 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 STRNO43815 780 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 PEX10O60683 326 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 PRKCZQ05513 592 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 GPR142Q7Z601 462 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms