RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 TTC22Q5TAA0 569 aa20.19■□□□□ 0.82
CCS-203ENST00000526058 TRIB2Q92519 343 aa20.19■□□□□ 0.82
CCS-203ENST00000526058 MKL1Q969V6 931 aa20.19■□□□□ 0.82
CCS-203ENST00000526058 SPATC1LQ9H0A9 340 aa20.19■□□□□ 0.82
CCS-203ENST00000526058 DIAPH3Q9NSV4 1193 aa20.19■□□□□ 0.82
CCS-203ENST00000526058 TTLL1O95922 423 aa20.18■□□□□ 0.82
CCS-203ENST00000526058 NDUFB10O96000 172 aa20.18■□□□□ 0.82
CCS-203ENST00000526058 PLS1Q14651 629 aa20.18■□□□□ 0.82
CCS-203ENST00000526058 LRRC47Q8N1G4 583 aaKnown RBP20.18■□□□□ 0.82
CCS-203ENST00000526058 MB21D1Q8N884 522 aa20.18■□□□□ 0.82
CCS-203ENST00000526058 ADAMTS5Q9UNA0 930 aa20.18■□□□□ 0.82
CCS-203ENST00000526058 NMT2O60551 498 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 FGRP09769 529 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 XRCC5P13010 732 aaKnown RBP20.17■□□□□ 0.82
CCS-203ENST00000526058 PTPREP23469 700 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 RGS2P41220 211 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 GJA8P48165 433 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 HAND2P61296 217 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 CCL14Q16627 93 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 IL17RBQ9NRM6 502 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 PPP1R9AQ9ULJ8 1098 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 ZMYM6O95789 1325 aa20.17■□□□□ 0.82
CCS-203ENST00000526058 SLC15A5A6NIM6 579 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 TSPY2A6NKD2 308 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 HIP1O00291 1037 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 ORC4O43929 436 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 RANBP6O60518 1105 aaKnown RBP20.16■□□□□ 0.82
CCS-203ENST00000526058 ERCC3P19447 782 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
CCS-203ENST00000526058 MAP2K5Q13163 448 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 TMEM132BQ14DG7 1078 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 U2AF1L4Q8WU68 220 aaKnown RBP20.16■□□□□ 0.82
CCS-203ENST00000526058 DEFB118Q96PH6 123 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 NBPF3Q9H094 633 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 IVNS1ABPQ9Y6Y0 642 aa20.16■□□□□ 0.82
CCS-203ENST00000526058 VWA5AO00534 786 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 SGPL1O95470 568 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 GRB14Q14449 540 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 SHCBP1Q8NEM2 672 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 NKX2-3Q8TAU0 364 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 SLF1Q9BQI6 1058 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 IL25Q9H293 177 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 PAK6Q9NQU5 681 aaPredicted RBP20.15■□□□□ 0.82
CCS-203ENST00000526058 TOMM22Q9NS69 142 aa20.15■□□□□ 0.82
CCS-203ENST00000526058 ZNFX1Q9P2E3 1918 aaKnown RBP20.15■□□□□ 0.82
CCS-203ENST00000526058 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
CCS-203ENST00000526058 RRP12Q5JTH9 1297 aaKnown RBP20.14■□□□□ 0.81
CCS-203ENST00000526058 NCAPG2Q86XI2 1143 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 GMCL1P1Q8NEA9 526 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 REPS2Q8NFH8 660 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 CHMP4CQ96CF2 233 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 APBA2Q99767 749 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.14■□□□□ 0.81
CCS-203ENST00000526058 FLRT1Q9NZU1 646 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 SYNPO2Q9UMS6 1093 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 STX8Q9UNK0 236 aa20.14■□□□□ 0.81
CCS-203ENST00000526058 RPTORQ8N122 1335 aa20.13■□□□□ 0.81
CCS-203ENST00000526058 PRKAR2AP13861 404 aaKnown RBP20.13■□□□□ 0.81
CCS-203ENST00000526058 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
CCS-203ENST00000526058 TBC1D10CQ8IV04 446 aa20.13■□□□□ 0.81
CCS-203ENST00000526058 TRMT44Q8IYL2 757 aaKnown RBP20.13■□□□□ 0.81
CCS-203ENST00000526058 NPLOC4Q8TAT6 608 aa20.13■□□□□ 0.81
CCS-203ENST00000526058 MROH8Q9H579 483 aa20.13■□□□□ 0.81
CCS-203ENST00000526058 LAMA4Q16363 1823 aa20.12■□□□□ 0.81
CCS-203ENST00000526058 ADORA2AP29274 412 aa20.12■□□□□ 0.81
CCS-203ENST00000526058 CACNB2Q08289 660 aaPredicted RBP20.12■□□□□ 0.81
CCS-203ENST00000526058 AKNAD1Q5T1N1 836 aa20.12■□□□□ 0.81
CCS-203ENST00000526058 MAP3K21Q5TCX8 1036 aa20.12■□□□□ 0.81
CCS-203ENST00000526058 HMX1Q9NP08 348 aaPredicted RBP20.12■□□□□ 0.81
CCS-203ENST00000526058 ZNF214Q9UL59 606 aaPredicted RBP20.12■□□□□ 0.81
CCS-203ENST00000526058 CEP290O15078 2479 aa20.12■□□□□ 0.81
CCS-203ENST00000526058 ZNF236Q9UL36 1845 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 STRNO43815 780 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 TFRCP02786 760 aaKnown RBP20.11■□□□□ 0.81
CCS-203ENST00000526058 HOXC6P09630 235 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 BMP3P12645 472 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 STAT3P40763 770 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 MFSD6Q6ZSS7 791 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 RIOX2Q8IUF8 465 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 PRPF38AQ8NAV1 312 aaKnown RBP20.11■□□□□ 0.81
CCS-203ENST00000526058 STAG1Q8WVM7 1258 aa20.11■□□□□ 0.81
CCS-203ENST00000526058 COBLO75128 1261 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 SLC34A2O95436 690 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 SLC25A27O95847 323 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 MCCP23508 829 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 NOVP48745 357 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 PPP4R3BQ5MIZ7 849 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 RASGRP2Q7LDG7 609 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 UBE2Q1Q7Z7E8 422 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 DPP9Q86TI2 863 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 KIFC2Q96AC6 838 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 DSCC1Q9BVC3 393 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 CRISPLD2Q9H0B8 497 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 FEM1BQ9UK73 627 aa20.1■□□□□ 0.81
CCS-203ENST00000526058 NEDD4P46934 1319 aa20.09■□□□□ 0.81
CCS-203ENST00000526058 TMEM232C9JQI7 657 aa20.09■□□□□ 0.81
CCS-203ENST00000526058 ZNF213O14771 459 aa20.09■□□□□ 0.81
CCS-203ENST00000526058 CCND3P30281 292 aaPredicted RBP20.09■□□□□ 0.81
CCS-203ENST00000526058 ISY1Q9ULR0 285 aaKnown RBP20.09■□□□□ 0.81
CCS-203ENST00000526058 MTMR7Q9Y216 660 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms