RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 CLEC16AQ2KHT3 1053 aa7.63□□□□□ -1.19
CSDE1-210ENST00000525878 GCM1Q9NP62 436 aa7.63□□□□□ -1.19
CSDE1-210ENST00000525878 COPRSQ9NQ92 184 aa7.63□□□□□ -1.19
CSDE1-210ENST00000525878 GPR160Q9UJ42 338 aa7.63□□□□□ -1.19
CSDE1-210ENST00000525878 TEX51A0A1B0GUA7 166 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 RNF4P78317 190 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 CWF19L2Q2TBE0 894 aaKnown RBP7.62□□□□□ -1.19
CSDE1-210ENST00000525878 NBPF9Q3BBW0 867 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 ARSHQ5FYA8 562 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 NBPF12Q5TAG4 269 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-210ENST00000525878 CDCP2Q5VXM1 449 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 ZNF605Q86T29 641 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 NLRX1Q86UT6 975 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.62□□□□□ -1.193e-6■■□□□ 12
CSDE1-210ENST00000525878 BRMS1Q9HCU9 246 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 GMIPQ9P107 970 aa7.62□□□□□ -1.19
CSDE1-210ENST00000525878 TMEM82A0PJX8 343 aa7.61□□□□□ -1.19
CSDE1-210ENST00000525878 TLR3O15455 904 aaKnown RBP7.61□□□□□ -1.19
CSDE1-210ENST00000525878 NUAK1O60285 661 aa7.61□□□□□ -1.19
CSDE1-210ENST00000525878 PDIA4P13667 645 aaKnown RBP7.61□□□□□ -1.19
CSDE1-210ENST00000525878 ITGAEP38570 1179 aa7.61□□□□□ -1.19
CSDE1-210ENST00000525878 EIF4A3P38919 411 aaKnown RBP7.61□□□□□ -1.19
CSDE1-210ENST00000525878 MLECQ14165 292 aa7.61□□□□□ -1.19
CSDE1-210ENST00000525878 ZNF655Q8N720 491 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-210ENST00000525878 TCTN2Q96GX1 697 aa7.61□□□□□ -1.19
CSDE1-210ENST00000525878 EHMT1Q9H9B1 1298 aa7.61□□□□□ -1.19
CSDE1-210ENST00000525878 PCDHB14Q9Y5E9 798 aa7.61□□□□□ -1.19
CSDE1-210ENST00000525878 RAG1P15918 1043 aa7.6□□□□□ -1.19
CSDE1-210ENST00000525878 KIR2DL1P43626 348 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-210ENST00000525878 KIR2DL2P43627 348 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-210ENST00000525878 TMC3Q7Z5M5 1100 aa7.6□□□□□ -1.19
CSDE1-210ENST00000525878 LINC00116Q8NCU8 138 aa7.6□□□□□ -1.19
CSDE1-210ENST00000525878 ASCC2Q9H1I8 757 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-210ENST00000525878 CNNM2Q9H8M5 875 aa7.6□□□□□ -1.19
CSDE1-210ENST00000525878 SUPT16HQ9Y5B9 1047 aaKnown RBP7.6□□□□□ -1.19
CSDE1-210ENST00000525878 NRDCO43847 1150 aa7.59□□□□□ -1.19
CSDE1-210ENST00000525878 INHBBP09529 407 aa7.59□□□□□ -1.19
CSDE1-210ENST00000525878 CRKP46108 304 aa7.59□□□□□ -1.19
CSDE1-210ENST00000525878 GALK1P51570 392 aa7.59□□□□□ -1.19
CSDE1-210ENST00000525878 OVOS1Q6IE37 1185 aa7.59□□□□□ -1.19
CSDE1-210ENST00000525878 MAP6Q96JE9 813 aa7.59□□□□□ -1.19
CSDE1-210ENST00000525878 FOXP3Q9BZS1 431 aa7.59□□□□□ -1.19
CSDE1-210ENST00000525878 HRKO00198 91 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 USP2O75604 605 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-210ENST00000525878 RPL10P27635 214 aaKnown RBP7.58□□□□□ -1.2
CSDE1-210ENST00000525878 POLR2BP30876 1174 aaKnown RBP7.58□□□□□ -1.2
CSDE1-210ENST00000525878 PDE6BP35913 854 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 CCNFP41002 786 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 SNW1Q13573 536 aaKnown RBP7.58□□□□□ -1.2
CSDE1-210ENST00000525878 BBS9Q3SYG4 887 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 ZNF296Q8WUU4 475 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-210ENST00000525878 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 KRTAP4-11Q9BYQ6 195 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 IRF2BPLQ9H1B7 796 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 CRTAC1Q9NQ79 661 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 TCFL5Q9UL49 500 aa7.58□□□□□ -1.2
CSDE1-210ENST00000525878 PCBP3P57721 371 aaKnown RBP7.57□□□□□ -1.2
CSDE1-210ENST00000525878 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
CSDE1-210ENST00000525878 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
CSDE1-210ENST00000525878 WAPLQ7Z5K2 1190 aa7.57□□□□□ -1.2
CSDE1-210ENST00000525878 REXO1Q8N1G1 1221 aaKnown RBP7.57□□□□□ -1.2
CSDE1-210ENST00000525878 HHIPL1Q96JK4 782 aa7.57□□□□□ -1.2
CSDE1-210ENST00000525878 SGPP1Q9BX95 441 aa7.57□□□□□ -1.2
CSDE1-210ENST00000525878 NCANO14594 1321 aa7.56□□□□□ -1.2
CSDE1-210ENST00000525878 OR14I1A6ND48 311 aa7.56□□□□□ -1.2
CSDE1-210ENST00000525878 SIGLEC6O43699 453 aa7.56□□□□□ -1.2
CSDE1-210ENST00000525878 MRPL58Q14197 206 aaKnown RBP7.56□□□□□ -1.2
CSDE1-210ENST00000525878 PRDM14Q9GZV8 571 aa7.56□□□□□ -1.2
CSDE1-210ENST00000525878 ADAMTS1Q9UHI8 967 aa7.56□□□□□ -1.2
CSDE1-210ENST00000525878 ZMYM5Q9UJ78 669 aa7.56□□□□□ -1.2
CSDE1-210ENST00000525878 MEIS3P2A8K0S8 358 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 PRRG2O14669 202 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 PRAMEF1O95521 474 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 CLCQ05315 142 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 NLRC3Q7RTR2 1065 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 SIRT2Q8IXJ6 389 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 C20orf173Q96LM9 149 aa7.55□□□□□ -1.2
CSDE1-210ENST00000525878 MBD1Q9UIS9 605 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-210ENST00000525878 CNOT6Q9ULM6 557 aaKnown RBP7.55□□□□□ -1.2
CSDE1-210ENST00000525878 SYPP08247 313 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 PNLIPP16233 465 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 HOXA5P20719 270 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 ADGRF1Q5T601 910 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 TMEM132EQ6IEE7 984 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 CEP128Q6ZU80 1094 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 KCTD3Q9Y597 815 aa7.54□□□□□ -1.2
CSDE1-210ENST00000525878 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 CLEC3AO75596 197 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 NME1P15531 152 aaKnown RBP7.53□□□□□ -1.2
CSDE1-210ENST00000525878 CEBPAP49715 358 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-210ENST00000525878 YBX1P67809 324 aaKnown RBP7.53□□□□□ -1.2
CSDE1-210ENST00000525878 SSPNQ14714 243 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 SLC14A2Q15849 920 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 ZNF385BQ569K4 471 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 LCE5AQ5TCM9 118 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 TMEM192Q8IY95 271 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 FCRL2Q96LA5 508 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-210ENST00000525878 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms